RetrogeneDB ID:
retro_mputfur_596
Organism:
Location:
GL896924.1:10890094-10890480 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
54.14 %
Coverage:
99.24 %
Frameshifts:
1
Stop codons:
3


Parental gene:
Parental gene symbol:
ANAPC15
Parental gene aliases:
No gene alias available
Parental gene description:
anaphase promoting complex subunit 15 [Source:HGNC Symbol;Acc:24531]

Genomic region (view in browser)





>retro_mputfur_596
CACCTGACCCTTTACCCCAGTCTAGGAGCCATGTCCATCTTGTTTCCCTCACTCTTCCCC
CATGTGACTGAGCACTGTGGTTTGATCTGGATTGGCCCTGTGTGGACGAGATGGAGCTAT
AGCAACAGCAAGAACAAGATCATTGGACCTGACTCCAGAGCATCACAGACAGAGATGACA
ACCTGGTACCTATTCATGAGCTATCCTGAGAGCACTATGATGACAAGGAAAAGGAGGATG
GAGATGATGATAAGGACAGTAAAGAGGACTCAGAGGACAAGGAGGACCTGCAGGACATGG
ATGACTACCAGCAGTCACCAGAAGCTGGAGAGGCCAATGAGGCAGACAAGGGAGGCAATG
AACAAGATCAGAACCAGAGGATGATC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
HLALYLSLGAMSTLFPSLFPRVTE-TLWFNLDRPCVEETEL-QQQEQQHQAWLQSIAEKDNNLVPIGKPASEHYDDEEEEDEDDDEDSEEDSEDDEDMQD
HL.LY.SLGAMS.LFPSLFP.VTE..LWF.LD.PCV.E.EL.QQQEQ.H...LQSI...D.NLVPI.....EHYDD.E.E...D..D.............
Retrocopy
HLTLYPSLGAMSILFPSLFPHVTE/ALWFDLDWPCVDEMEL*QQQEQDHWT*LQSITDRDDNLVPIHELS*EHYDDKEKE---DGDDDKDSKXXXXXXXX


Parental protein
MDEMNDYNESPDDGEVNEVDMEGNEQDQDQWMI
.........SP..GE.NE.D..GNEQDQ.Q.MI
Retrocopy
XXXXXXXQQSPEAGEANEADKGGNEQDQNQRMI


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide