RetrogeneDB ID:
retro_mputfur_599
Organism:
Location:
GL896924.1:6176531-6176967 (-)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
86.99 %
Coverage:
92.31 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_599
CCTTTTACGAAGATGGTGCCGAAAGCTAAGAAGGAAACCCCTGCGGTGCTGAAAGGTGTC
CACAGTCACAAAAAAAAGAAGATCCGCACATCACCCACGTTACGACGACCCAAGACTCTG
CGTCTCCGAAGGCAACCCAAATACCCTCGAAAGAGCGCCCCCAGGAGAAACAAGCTTGAC
CACTTATGCCATCATCAAGTTCCCCCTGACTACTGAGTCAGCCGTGAAGAAAATAGAAGA
CAACAACACACTTGTGTTCATTGTGGATGTCAAGGCCAACAAGCACCAGATCAAACAGGC
TGTGAAGAAGCTCTATGACATTGATGTAGCCAAGGTCAACAACACCTTAATCAGGCCTGA
TGGAGAGAAGAAGGCACACGTTCGGCTGGCCCCTGACTATGATGCTTCGGATGTTGCCAA
CAAAATTGGGATCATC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
PKAEAKAKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDH-YAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQ
P......KA.K...AVLKGVHSH...KIRTSPT.RRPKTLRLRRQPKYPRKSAPRRNKLDH.YAIIKFPLTTESA.KKIEDNNTLVFIVDVKANKHQIKQ
Retrocopy
PFTKMVPKAKKETPAVLKGVHSHXXXKIRTSPTLRRPKTLRLRRQPKYPRKSAPRRNKLDH\YAIIKFPLTTESAVKKIEDNNTLVFIVDVKANKHQIKQ


Parental protein
AVKKLYDIDVAKVN-TLIRPDGEKKAYVRLAPDYDALDVANKIGII
AVKKLYDIDVAKVN.TLIRPDGEKKA.VRLAPDYDA.DVANKIGII
Retrocopy
AVKKLYDIDVAKVNNTLIRPDGEKKAHVRLAPDYDASDVANKIGII


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide