RetrogeneDB ID:
retro_mputfur_6
Organism:
Location:
GL897020.1:2631587-2631986 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
100.0 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
Rps12-ps3
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein S12, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3704503]

Genomic region (view in browser)





>retro_mputfur_6
ATGGCCGAGGAAGGCATTGCTGCTGGAGGTGTAATGGACGTTAATACTGCTTTACAAGAG
GTGCTGAAGACCGCCCTCATCCACGATGGCCTAGCACGTGGAATTCGCGAAGCTGCCAAA
GCCTTAGACAAGCGCCAAGCCCATCTTTGTGTGCTTGCATCCAACTGTGATGAACCTATG
TATGTCAAGTTGGTGGAGGCCCTTTGTGCTGAACACCAAATCAACCTAATCAAGGTTGAT
GACAACAAGAAACTAGGGGAGTGGGTAGGCCTCTGTAAAATTGACAGAGAGGGAAAACCC
CGTAAAGTGGTTGGTTGCAGTTGTGTGGTGGTTAAGGACTATGGCAAAGAGTCTCAGGCG
AAGGATGTCATCGAGGAATACTTCAAATGCAAGAAATGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAEEGIAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKP
MAEEGIAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKP
Retrocopy
MAEEGIAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKP


Parental protein
RKVVGCSCVVVKDYGKESQAKDVIEEYFKCKK
RKVVGCSCVVVKDYGKESQAKDVIEEYFKCKK
Retrocopy
RKVVGCSCVVVKDYGKESQAKDVIEEYFKCKK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide