RetrogeneDB ID:
retro_mputfur_601
Organism:
Location:
GL896925.1:4852045-4852990 (+)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
93.65 %
Coverage:
56.86 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_601
AAAAGAAGAAGCTATACTGTATCTACGTTGCTATTGGTCAGAAGAGATCCACTTGCCCAG
TTGGTGAAGAGACTCACAGATGCAGATGCCATGAAGTACACCATTGTGGTTTCGGCTGCT
GCTTTTGATGCTGCTCCACTTCAGTACCTGGCTCCTTATTCTGGCTGTTCTATGGGAGAA
TATTTTAGAGATAATGGCAAACATGCTTTGATCATCTACGATGACTTATCCAAACAGGCT
GTTGCCTATCGTCAGATGTCTCTGCTGCTCCGCTGGCCTCCTGGTCGTGAGGCCTATCCT
GGTGATGTGTTCTACCTACATTCCCGTCTCCTAGAGAGAGCAGCCAAAATGAACGATTCT
TTTGGTGGTGGCTCCTTGACTGCTTTACCAGTCATAGAAACGCAAGCTGGTGATGTGTCT
GCTTACATTCCAACAAATGTCATTTCTATCACTGACGGACAGATCTTCTTGGAAACAGAA
TTGTTCTACAAAGGTATCCGCCCTGCCATTAACGTTGGTTTGTCTGTGTCCCGTGTTGGA
TCTGCTGCCCAAACCAGGGCCATGAAGCAGGTGGCAGGTACCATGAAGCTGGAATTGGCT
CAGTATCGTGAGGTTGCTGCTTTTGCCCAGTTCGGTTCTGACCTTGATGCTGCCACTCAA
CAGCTCTTGAGTCGTGGTGTGCGATTGACTGAGTTGCTGAAGCAAGGACAGTATTCTCCC
ATGGCAATTGAAGAACAAGTGCCTATTATTTATGCTGGTGTAAGAGGGTATCTTGATAAA
TTGGAGCCCAGCAAGATCACAAAGTTTGAGCATGCTTTCCTGGCTCATGTTATCAGCCAG
CACCAGGCCCTGTTGGGCAATATTAGGACTGATGGAAAGATCTCAGAACAGTCAGATGCT
AAGCTGAAAGAAATTGTAACAAACTTCTTGGCTGGATTTGAAGCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
KKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYP
K...Y.........R...AQLVKRLTDADAMKYTIVVSA.A.DAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLR.PPGREAYP
Retrocopy
KRRSYTVSTLLLVRRDPLAQLVKRLTDADAMKYTIVVSAAAFDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRWPPGREAYP


Parental protein
GDVFYLHSRLLERAAKMNDSFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELA
GDVFYLHSRLLERAAKMNDSFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELA
Retrocopy
GDVFYLHSRLLERAAKMNDSFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELA


Parental protein
QYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFEHAFLAHVISQHQALLGNIRTDGKISEQSDA
QYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQV..IYAGVRGYLDKLEPSKITKFEHAFLAHVISQHQALLGNIRTDGKISEQSDA
Retrocopy
QYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVPIIYAGVRGYLDKLEPSKITKFEHAFLAHVISQHQALLGNIRTDGKISEQSDA


Parental protein
KLKEIVTNFLAGFEA
KLKEIVTNFLAGFEA
Retrocopy
KLKEIVTNFLAGFEA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide