RetrogeneDB ID:
retro_mputfur_620
Organism:
Location:
GL896927.1:11795345-11795700 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
71.43 %
Coverage:
100.0 %
Frameshifts:
1
Stop codons:
3


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_620
GCTTTTAAAGACACTGGGAAGACAACCATGGAACCAAAGGTGATGATTCACCAAATTAGA
ATTACTCTAACTAGCCACAGAATAAAATCTTTGTAAAAGATATGTGCTGATTTGCTCAGA
GGCATAAAGGAAAAGAATCTCAAAGTGGAAGAACCAGTTCAGATGCCTACCAAGATTCTG
ATAATCACCATAAGAAAAACTCCCAGTTGTGAAGTTTCAAAGACTTGAGCTCATTTTCAG
AAGAGGATTCACAAGTGACTCATTAATTTTTCAAGGTCCTTCTGAGATTGTTAAACAAAT
CACTTCTATCAGTATTGAGCCAGAAGTGGAGGTTCAAGTCACATTTGCGGATGCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLID-LHSPSEIVKQ
AFKDTGKT..EP.V.IH.IRITLTS...KSL.K.CADL.RG.KEKNLKV..PV.MPTK.L.IT.RKTP..E.SKT...FQ.RIHK.LI.....PSEIVKQ
Retrocopy
AFKDTGKTTMEPKVMIHQIRITLTSHRIKSL*KICADLLRGIKEKNLKVEEPVQMPTKILIITIRKTPSCEVSKT*AHFQKRIHK*LIN\FQGPSEIVKQ


Parental protein
ITSISIEPGVEVEVTIADA
ITSISIEP.VEV.VT.ADA
Retrocopy
ITSISIEPEVEVQVTFADA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide