RetrogeneDB ID:
retro_mputfur_622
Organism:
Location:
GL896927.1:12578616-12578998 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
63.24 %
Coverage:
68.91 %
Frameshifts:
2
Stop codons:
4


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_622
CCTGAGTCCGTCTCCAAAAAAAAAGCTGGTTATGATATCTCCAAGGCAACCAGTGATTGG
GAGGGTCTCAGGACAACAGTGATACTGACCATTCAGAACGGACAACCCAGATTGAAGTGG
TACTTTCTGTCTCTGACCTGATTATCAAAGCCCTCAAGGAACCTCCAAGAGACAGAAAGA
AGCAGAAAGGCATTTAGCCCAGTGAAAATATCACTTTTGATGAGATTGTCAACATTGCCT
GACAGATGCGGCACTGATTTTTAGCCAAAGAATTCTCTGAAACCATTAAAAAAAAGATCC
TGGAAACTTTCCAATTTGTGTGCTGCAATATTAATGCCGCCGCCCTCATGACATCAATAG
TGGTGCAGTGCAATGACCAGCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
PLGLSPKKVGDDIAKATGDWKGLRITVKLTIQN-RQAQIEVVPSASALIIKALKEPPRDRKKQKNSAVKHSGNITFDEIVNIARQMRHRSLARELSGTI-
P...S....G.DI.KAT.DW.GLR.TV.LTIQN.R..QIEVV.S.S.LIIKALKEPPRDRKKQK......S.NITFDEIVNIA.QMRH..LA.E.S.TI.
Retrocopy
PESVSXXXAGYDISKATSDWEGLRTTVILTIQN/RTTQIEVVLSVSDLIIKALKEPPRDRKKQK--GI*PSENITFDEIVNIA*QMRH*FLAKEFSETIX


Parental protein
KEILGTAQSVGCNVDG-RHPHDIIDDINSGAVECPA
..IL.T.Q.V.CN....R.PHDI....NSGAV..PA
Retrocopy
XXILETFQFVCCNINA/RRPHDI----NSGAVQ*PA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide