RetrogeneDB ID:
retro_mputfur_624
Organism:
Location:
GL896927.1:15142381-15142861 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
59.76 %
Coverage:
60.59 %
Frameshifts:
3
Stop codons:
3


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_624
CAGGTGTTGAAGATTATGCCAGTGTAAAAGCAGACCTGTGCTGGCCAGTGGGCCAGGATT
AGGACATTTGCCACCATTAAGGATTGCAATGGACATGTTGTTCTGGGGGTAAAGTGTTCC
CAGGAGGTAGTCATTGCCATCCGTGGTGCCAACATCTAGCTACACTCTCCATCATCCTGT
GCAGTAAGGCTACTGGGTGAACAAGATCAGCAAGCCCCACACCATCACTTGCAAGGAGAC
CTGCCCCTGTGGCTCTGTGCCGGTGCCCTGCACCACCATCTCCTCCCCAACCCAAGGCTC
TGTCATCATCTAGGCCACTTTGCCTGAGATGGCCAGCATCAATGACTGCCACACCTTGGC
CAGGGGCTGTACCACTACCCTTGACTTCACCAAGGACACCTTTAATGTCATATCCAAGAC
CTACAGCATTCTTACCCCTGAGCTCTGGAAAGACATGTGCTCACCAAGTCTTCCTATCAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
EVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAII-LAKLSIV-PVRRGYWGNKIGKPHTVPCKVTGRCGSVLV--RLIPAP-
.VLKIMPV.KQT.AGQ..R...F..I.D.NGHV.LGVKCS.EV..AIRGA.I.LA.LSI..PV..GYW.NKI.KPHT..CK.T..CGSV.V....I..P.
Retrocopy
QVLKIMPV*KQTCAGQWARIRTFATIKDCNGHVVLGVKCSQEVVIAIRGANI/LATLSII/PVQ*GYWVNKISKPHTITCKETCPCGSVPVPCTTISSPT


Parental protein
RGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKET-VFTKSPYQ
.G..I..A..P.....MA.I.DC.T.ARGCT.TL..F.K.TF..ISKTYS.LTP.LWK...V.TKS.YQ
Retrocopy
QGSVII*ATLPE----MASINDCHTLARGCTTTL-DFTKDTFNVISKTYSILTPELWKDM/VLTKSSYQ


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide