RetrogeneDB ID:
retro_mputfur_628
Organism:
Location:
GL896927.1:10632249-10632490 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
59.3 %
Coverage:
73.68 %
Frameshifts:
2
Stop codons:
0


Parental gene:
Parental gene symbol:
RPLP1
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein, large, P1 [Source:HGNC Symbol;Acc:10372]

Genomic region (view in browser)





>retro_mputfur_628
GTGGCCTCAGCCCCTGAGCTCCCTGCACCTACTGCCTTCTTCACCATGACGATGAGGTGA
CCATCACAGAGGGTAAGATCAATGCTCTATTAAAGCAGCCAATATAAATGTTGAGCCTTT
CTGGACAGATTGGTTTGCAAAGGCACCAGCCAGTGTCAGCATTGGGAGCCTCATCTGCAG
CCCTGGGGCTGGAGGACTGCTGGCACCTCTAACCCCCTCCACCTCTATGGCCCCAGCCAC
G


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MASVSELA-CIYSALILHDDEVTVTEDKINAL-IKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPST
.AS..EL..C.Y..L..HDDEVT.TE.KINAL.IKAA..NVEPFW...FAKA.A.V.IGSLIC..GAGG....A...P....AP.T
Retrocopy
VASAPELP/CTY-CLLHHDDEVTITEGKINAL/IKAANINVEPFWTDWFAKAPASVSIGSLICSPGAGG--LLAPLTPSTSMAPAT


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide