RetrogeneDB ID:
retro_mputfur_632
Organism:
Location:
GL896928.1:5024169-5024727 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
70.74 %
Coverage:
97.41 %
Frameshifts:
0
Stop codons:
4


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_632
AGGTGAAGGTGCAACAGACTTTGGTCATCCTAAATCCAAGTTCACTGGACAACAGCCATC
TCCAATATGCCACCTACGTTTGACCCCAATAAGATCAAAGTCATGTACCTGAGGTGCATC
ACTGGGGAAATCAGAGCCACATCTGCCCTGGCCCCAAAGATTGGCCCCTTGGGTCTCTTT
CCAAACAAGTTTGTTAATGACATCAGCAAGGCAGCCAGTGATTGGAATGGTCTGAGGATT
ACAGTGGAACTGACCATTCAGAAAGGACAGGGCCAGATTGAAGTGGTACCTTCTGCCTCT
GCCCTGATTATCAAAGCCCTCAAGGAATTACCATCAGACAGAAAGTAGCAGAAAGACTTT
AAGTGCAGTGGAAATACCACTCTTGATGAGATTGTTAACATTGACCCATAGATGCGGTAC
CAGTCTTTAGCCAGAGAATTCTCTGGAACCATTAAAAAGATCTTGAGGACTGCCCAATCT
GTAGGCTGCAATGTCGATGACAACCATTCTCATGACATTGTTAATGACATCAATAATGGT
ACAGTGGATTGCCCAGCC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
RQRCNSLRSSRIRVHPTPATSAMPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSAS
R.RCN.L.SS.I.VH.T.A.S.MPP.FDPN.IKV.YLRC..GE..ATSALAPKIGPLGL.P.K...DI.KA..DW.GLRITV.LTIQ..Q.QIEVVPSAS
Retrocopy
R*RCNRLWSS*IQVHWTTAISNMPPTFDPNKIKVMYLRCITGEIRATSALAPKIGPLGLFPNKFVNDISKAASDWNGLRITVELTIQKGQGQIEVVPSAS


Parental protein
ALIIKALKEPPRDRKKQKNSAVKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECPA
ALIIKALKE.P.DRK.QK....K.SGN.T.DEIVNI...MR..SLARE.SGTIK.IL.TAQSVGCNVD..H.HDI..DIN.G.V.CPA
Retrocopy
ALIIKALKELPSDRK*QKD--FKCSGNTTLDEIVNIDP*MRYQSLAREFSGTIKKILRTAQSVGCNVDDNHSHDIVNDINNGTVDCPA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide