RetrogeneDB ID:
retro_mputfur_637
Organism:
Location:
GL896929.1:3939068-3939833 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
89.02 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_637
ATGACCCTAAGCAGAGTTCTGATTCTGGGGACTCTTGCCCTGACCACCATGATGAGCCCT
GGTGGCAGTGAAGACATTGTGGCTGACCATGTTGGTTCCTATAACATAGACGTCTACCAG
TCCTATGGTCCCTCTGGACAGTCCACTCAAGAATTTGATGGAGATGAGGAATTCTATGTG
GACTTGGAGAAAAAGGAAACTGTCTGGCGGCTGCCTGTGTTTAGTACATTTGCAAGTTTT
GACCCACAAGGTGCACTGAGAAAATTGGCAATAGCAAAACAAAACTTGAACATCTTGACT
AAACGCTCCAACTATACCACTGCTACCAATGAGGTTCCTGAGGTGACAGTGTTTCCCAAG
TCTCCTGTGAGTCTGGGTCAGCCCAACACCCTCATCTGTCTTGTGGACAACATCTTTCCT
CCTGTGATCAATGTCACGTGGTTGAAGAACAGGCACTCAGTCACAGAAGGTGTTTCTGAA
ACCAGATTCCTCGCCAGGAAGGACCATTCCTTCCTAAAGTTCAGTTACCTCACCTTCCTC
TCTTCTGCTGATGATATTTATGATTGCAAGGTGGATCACTGAGGCCTGGATGAACCACTT
CTGAAACACTGGGAACCTGAAATTCCAGCCCCTATGTCAGAGCTGACAGAAACCGTGGTC
TGTGCCCTGGGGTTGTCTGTGGGCCTTGTGGGCATTGTGGTGGGCACCGTCTTCATTATC
CAAGGCCTGCGCTCAAGTGGTGCTTCCAGACATCAAGGACCCTTG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MTLNRVLILGTLALTTVMSPGGSEDIVADHAASYGINVYQSYGPSAQYTHEFDGDEEFYVDLEKKETVWQLPMFQTLGSFDPQGALRNLAVSKQNLNILT
MTL.RVLILGTLALTT.MSPGGSEDIVADH..SY.I.VYQSYGPS.Q.T.EFDGDEEFYVDLEKKETVW.LP.F.T..SFDPQGALR.LA..KQNLNILT
Retrocopy
MTLSRVLILGTLALTTMMSPGGSEDIVADHVGSYNIDVYQSYGPSGQSTQEFDGDEEFYVDLEKKETVWRLPVFSTFASFDPQGALRKLAIAKQNLNILT


Parental protein
KRSNYTAATNEVPETTLFLKSPVMLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSETSFLAKKDHSFLKFSYLTFLPSADDIYDCKVEHWGLDEPL
KRSNYT.ATNEVPE.T.F.KSPV.LGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSET.FLA.KDHSFLKFSYLTFL.SADDIYDCKV.H.GLDEPL
Retrocopy
KRSNYTTATNEVPEVTVFPKSPVSLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSETRFLARKDHSFLKFSYLTFLSSADDIYDCKVDH*GLDEPL


Parental protein
LKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIVQGLRSSGASRHQGPL
LKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFI.QGLRSSGASRHQGPL
Retrocopy
LKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIQGLRSSGASRHQGPL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide