RetrogeneDB ID:
retro_mputfur_66
Organism:
Location:
GL896945.1:2012572-2013118 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
65.71 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_66
TGCACACCAACCATGAGCGACCATATCTGCCAGAATTTTTCTGCCAAGGTGGAGGCCACA
CTCCAGCACCTCATCAACCTGCATCTGCAGGCCTCCTCCACCTACCTCTATCTGCGCTTT
TATTTTGAAGGTAACAATGTAGCTCTGAACGGCATGGGCCGCTTCTTCCAAGAGTTGGCT
GAGGAGAAGCAGAAAGGTGCCCGGTGTTTCTTGAAGATGCAAAGCCAGTGGAGCGACTTC
CCCGTTCTCCCGGATGAGCAGAAGCTGTCCGAAGATGAGTGGCTTAGCAGCGTGGATGCT
ATGGAAGCTGCGATGGTCTTGGAGAAGAGCCTGAACCAGGCCCTTCTGGATCTGCATGCC
CTGGGTGCTGCCAACGCAGATCCTCATCTCTGTGATTTTCTGGAGAGCCACTTCCTGGAA
GAGGAGATGAAGATCATCAAGAGGATGGGTGACCACCTAACTAACCTCCGCAGGCTGGCC
AACCCCCAAGGGGGGCTGAGTGAGTATCTCTTCGGAAAGCTCACCCTGAAGTCTGATGAG
GAGACT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MSSQIRQNYSTEVEAAVNRLVNMHLRASYTYLSLGFYFDRDDVALEGVGHFFRELAEEKREGAERLLKMQNQRGGRALFQDVQKPSQDEWGKTLDAMEAA
MS..I.QN.S..VEA....L.N.HL.AS.TYL.L.FYF....VAL.G.G.FF.ELAEEK..GA...LKMQ.Q........D.QK.S.DEW....DAMEAA
Retrocopy
MSDHICQNFSAKVEATLQHLINLHLQASSTYLYLRFYFEGNNVALNGMGRFFQELAEEKQKGARCFLKMQSQWSDFPVLPDEQKLSEDEWLSSVDAMEAA


Parental protein
LVLEKSLNQALLDLHALGSARTDPHLCDFLENHFLDEEVKLIKKMGDHLTNLRRLAGPQAGLGEYLFERLTLKHD
.VLEKSLNQALLDLHALG.A..DPHLCDFLE.HFL.EE.K.IK.MGDHLTNLRRLA.PQ.GL.EYLF..LTLK.D
Retrocopy
MVLEKSLNQALLDLHALGAANADPHLCDFLESHFLEEEMKIIKRMGDHLTNLRRLANPQGGLSEYLFGKLTLKSD


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide