RetrogeneDB ID:
retro_mputfur_662
Organism:
Location:
GL896932.1:9530722-9531057 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
73.04 %
Coverage:
98.28 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
DNAJC19
Parental gene aliases:
No gene alias available
Parental gene description:
DnaJ (Hsp40) homolog, subfamily C, member 19 [Source:HGNC Symbol;Acc:30528]

Genomic region (view in browser)





>retro_mputfur_662
GCCAGTACAGTGGGAGCAGCTGGACTGATCACAGCTGCCACTGGATTTGCAGGCCATTAT
ATTTTCCAAGCCATGAAACATATGAAGCCTCAAGTAAAACAAGTTTTTAAAACAAAATCT
GTCTTCAGTGGTGGCTATCATAAAGGTGGGTTTGAACCCAAAATGATGAAACAGAAGCAG
CATTAATAGTAGGCATAAACCCTACTGCCAATAAAGGGGAAATAAGAGATGCTCATCAAT
GAATTATGCTTTTAAATCACCCACACAGGGTTGGATCTCCTTATTTTGCAGCCAAAATCA
ATGAAGCTCAAGATTTACTAGACAGCCAAGCTAAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
ASTVVAVGLTIAAAGFAGRYVLQAMKHMEPQVKQVFQSLPKSAFSGGYYRGGFEPKMTKR-EAALILGISPTANKGKIRDAHRRIMLLNHPDKGGSPYIA
ASTV.A.GL..AA.GFAG.Y..QAMKHM.PQVKQVF....KS.FSGGY..GGFEPKM.K..EAALI.GI.PTANKG.IRDAH..IMLLNHP...GSPY.A
Retrocopy
ASTVGAAGLITAATGFAGHYIFQAMKHMKPQVKQVFKT--KSVFSGGYHKGGFEPKMMKQ/EAALIVGINPTANKGEIRDAHQ*IMLLNHPHRVGSPYFA


Parental protein
AKINEAKDLLEGQAK
AKINEA.DLL..QAK
Retrocopy
AKINEAQDLLDSQAK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide