RetrogeneDB ID:
retro_mputfur_669
Organism:
Location:
GL896933.1:947541-947978 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
62.75 %
Coverage:
73.04 %
Frameshifts:
4
Stop codons:
3


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_669
TGTTGGCAGTACCACCAGCTCTCTGTGCTTCACAGAACCCCTGGCCCATCCTAGCCCAGT
AAAGCCTGCAGACTGGGGTGCTAGACCAGACAAGGTTACATCATATATTGGATTCGTGTG
CAATGTTGTAGCCACAAATGCCCAGCTCTAAGGGTGCTACCTAGGGGTGCCTGTCCATCA
TGGTATTAACCAGCTAAAGCTTGCCCAAAGCCTTTGGTCTGTTGCAGTTGCTAGATGCCA
CTGTGGGACTCTCAGAGTCTTGAATTCTTACTGGGTTGGTGAAGGTTACATGTATAAATC
ATTTGAGATTATCCTCTCTGATGCATTCCATAAAACTTTCAGAAGAAATCCTGACACCAG
TGGACACCAGACCAGTCCAAAAGCACAGGAAGATGTGAGGACTGACATCTGCAGGCTGTG
GGTGCTGTGGCATTGGG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
CWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPV-PKGAT-YGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGED
CWQY.QLS.LHR.P.P..P.KA.RLG....QGY.IY.IRV.....K.P...KGAT..G.PVHHG.NQLK.A.SL.SVA..R...HCG.LRVLNSYWVGE.
Retrocopy
CWQYHQLSVLHRTPGPS*PSKACRLGC*TRQGYIIYWIRVQCCSHKCPA/SKGAT/LGVPVHHGINQLKLAQSLWSVAVARC--HCGTLRVLNSYWVGEG


Parental protein
STYKFFEVILIDPFHKAIRRNPDT-QWI-TKPVHKHREMRGLTSAGRKSRGLG
..YK.FE.IL.D.FHK..RRNPDT.QW..T.PV.KHR.M.GLTSAG....G.G
Retrocopy
YMYKSFEIILSDAFHKTFRRNPDT/QWT/TRPVQKHRKM*GLTSAGCGCCGIG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide