RetrogeneDB ID:
retro_mputfur_67
Organism:
Location:
GL896912.1:19541638-19542391 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
97.98 %
Coverage:
98.02 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
NFU1 iron-sulfur cluster scaffold-like protein [Source:UniProtKB/TrEMBL;Acc:G9KD99]

Genomic region (view in browser)





>retro_mputfur_67
CCTTTAAAGAAGAGATTAAGTTGGGCGGTTGCTGCTGCGGGGCTGCGTAGGCGATTCTGT
CCTATGATGAATCCATACACCATTAAGAAACAGCTTCTGCATCAGTTTGTACATAAACCA
CTTTTCCCACTGCCTGCAACCTTATGTAACACAGTGAGACACATGTTTATTCAAACACAA
GATACTCCAAATCCCAACAGTTTAAAGTTTATCCCAGGAAAACCAGTTCTTGAGACAAGG
ACCATGGATTTTCCCACACAAGCTGCAGCATTTCGCTCCCCTCTGGCTAGGCAGTTATTT
AGAATTGAAGGAGTAAAAAGTGTCTTTTTTGGACCAGATTTCATCACTGTCACAAAGGAA
AGTGAAGAGTTAGACTGGAATTTACTGAAACCAGATATTTATGCAACAATCATGGATTTC
TTTGCTTCTGGCTTACCCTTAGTTACTGAGGAAACATCTTCAGGAGAAGCAGGATCTGAA
GAAGATGATGAAGTTGTGGCAATGATTAAGGAATTGTTAGATACTAGAATACGGCCAACT
GTGCAGGAAGACGGAGGAGATGTGATCTATAAAGGCTTTGAAGATGGCATCGTACACCTC
AAACTCCAAGGTTCTTGTACCAGCTGCCCCAGTTCAATCATTACTCTTAAAAATGGAATT
CAGAACATGCTGCAGTTTTATATTCCGGAAGTAGAGGGTGTAGAACAGGTTATGGATGAT
GAATCAGATGAAAAAGAAGCTAACTCACCTTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
RLRWGAAVAAAGLRRRFCPMMNPYTIKKQLLHQFVHKPLFPLPATLCNTVRHMFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRI
RL.W..AVAAAGLRRRFCPMMNPYTIKKQLLHQFVHKPLFPLPATLCNTVRHMFIQTQDTPNPNSLKFIPGKPVLETRTMDFPT.AAAFRSPLARQLFRI
Retrocopy
RLSW--AVAAAGLRRRFCPMMNPYTIKKQLLHQFVHKPLFPLPATLCNTVRHMFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTQAAAFRSPLARQLFRI


Parental protein
EGVKSVFFGPDFITVTKESEELDWNLLKPDIYATIMDFFASGLPLVTEETSSGEAGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKL
EGVKSVFFGPDFITVTKESEELDWNLLKPDIYATIMDFFASGLPLVTEETSSGEAGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV.LKL
Retrocopy
EGVKSVFFGPDFITVTKESEELDWNLLKPDIYATIMDFFASGLPLVTEETSSGEAGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVHLKL


Parental protein
QGSCTSCPSSIITLKNGIQNMLQFYIPEVEGVEQVMDDESDEKEANSP
QGSCTSCPSSIITLKNGIQNMLQFYIPEVEGVEQVMDDESDEKEANSP
Retrocopy
QGSCTSCPSSIITLKNGIQNMLQFYIPEVEGVEQVMDDESDEKEANSP


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide