RetrogeneDB ID:
retro_mputfur_674
Organism:
Location:
GL896933.1:8449607-8450063 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
80.92 %
Coverage:
55.68 %
Frameshifts:
0
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_674
CATCTAACAGTGAAGAAAATTTTTGTTGGTGGTATTAAAGAAGATACAGAAGAATATAAT
TTGAGAGACTACTTTGAAAAGTATGGCAAGATTGAAACCATAGAAGTTATGCAAGACAGG
CAGAGTGGAAAAAAGACAGGATTTGCTTTTGTAACTTTTGATGATCATGATACAGTTGAT
AAAATTGTTGTTTAGACATACCACACTATTAATGGGCACAATTGTGAAGTGAAAAAGGCC
CTTTCTAAACAAGAAATGCAGTCTGCTGCATCACAAAGAGGTCGAGGAAGTGGGTCTGTC
AACTTCACAGGTCGTAGAGGAAACTTTGGAGGTGGTGGTAACTTTGGCCGTGGTGGAAAC
TTTGGTGCAAGAGGAGGGTATGGTGGTGGAGGTGGTGGCAGCAGAGGTAGTTATGGAAGA
GGTAATGGTGAATATAATGGATTTGGGGGTGATGGT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
HLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGGSG
HLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVM.DRQSGKK.GFAFVTFDDHDTVDKIVV..YHTINGHNCEVKKALSKQEMQSA.SQRGRG.GS.
Retrocopy
HLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMQDRQSGKKTGFAFVTFDDHDTVDKIVV*TYHTINGHNCEVKKALSKQEMQSAASQRGRGSGSV


Parental protein
NFMGRGGNFGGGGNFGRGGNFGGRGGYGGGGGGSRGSYGGGDGGYNGFGGDG
NF.GR..................RGGYGGGGGGSRGSYG.G.G.YNGFGGDG
Retrocopy
NFTGRRXXXXXXXXXXXXXXXXARGGYGGGGGGSRGSYGRGNGEYNGFGGDG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide