RetrogeneDB ID:
retro_mputfur_682
Organism:
Location:
GL896934.1:13175200-13175584 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
98.44 %
Coverage:
85.33 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
UBE2D2
Parental gene aliases:
No gene alias available
Parental gene description:
ubiquitin-conjugating enzyme E2D 2 [Source:HGNC Symbol;Acc:12475]

Genomic region (view in browser)





>retro_mputfur_682
CAATGTTCTGCAGGTCCAGTTGGGGATGATATGTTTCATTGGCAAGCCACAATTATGGGA
CCTAATGACAGCCCATATCAAGGCGGTGTATTCTTTTTGACAATTCATTTTCCTACAGAC
TACCCCTTCAAACCACCTAAGGTTGCATTTACAACAAGAATTTATCATCCAAATATTAAC
AGTAATGGCAGCATTTGTCTCGATATTCTAAGATCACAGTGGTCTCCTGCTTTAACTATT
TCTAAAGTTCTTTTATCCATTTGTTCACTGCTATGTGATCCAAACCCAGATGACCCCCTA
GTGCCAGAGATTGCACGGATCTATAAAACAGACAGAGATAAGTACAACAGAATATCTCGG
GAATGGACTCAGAAGTATGCCATG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
QCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPL
QCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPL
Retrocopy
QCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPL


Parental protein
VPEIARIYKTDREKYNRIAREWTQKYAM
VPEIARIYKTDR.KYNRI.REWTQKYAM
Retrocopy
VPEIARIYKTDRDKYNRISREWTQKYAM


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide