RetrogeneDB ID:
retro_mputfur_683
Organism:
Location:
GL896934.1:2140802-2141129 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
77.27 %
Coverage:
94.83 %
Frameshifts:
0
Stop codons:
3


Parental gene:
Parental gene symbol:
NDUFA5
Parental gene aliases:
No gene alias available
Parental gene description:
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 [Source:HGNC Symbol;Acc:7688]

Genomic region (view in browser)





>retro_mputfur_683
GTTTTGCTGAAGACCACCAGCCTTGAGCGACTGGCTGTATGTGAGACACACAAGAGGCTA
CGACTATTATACACAAAGATTCTTGATGTTCTTGAGCAAATTCCTACAAGTGCAGCATAT
AGAAACTATACAGAACAGATTACAAATGAATAGCTGAGTATGCTTAAAGCCGAACCAGAT
GTTAAGAAATTAGAAGCCCAGCTTCAGTGTGGCCAACTAGAAGAGATGATTCTTTAGGCT
GGAAATGAACTAAGTCTGGCAAGAAAAATAATGCAGTGGGAATCATGGGAGCTGCTAGTG
GAAGAACCTCCTGCAAACAAATAGAAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
LLKKTTGLVGLAVCESPHERLRILYTKILDVLEQIPKNAAYRKYTEQITNEKLSMVKAEPDVKKLEDQLQCGQLEEVILQAENELSLARKMLQWKPWEPL
.L.KTT.L..LAVCE..H.RLR.LYTKILDVLEQIP..AAYR.YTEQITNE.LSM.KAEPDVKKLE.QLQCGQLEE.IL.A.NELSLARK..QW..WE.L
Retrocopy
VLLKTTSLERLAVCET-HKRLRLLYTKILDVLEQIPTSAAYRNYTEQITNE*LSMLKAEPDVKKLEAQLQCGQLEEMIL*AGNELSLARKIMQWESWELL


Parental protein
VEEPPANQWK
VEEPPAN..K
Retrocopy
VEEPPANK*K


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide