RetrogeneDB ID:
retro_mputfur_687
Organism:
Location:
GL896934.1:11101460-11101742 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
55.67 %
Coverage:
63.82 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
RPS18
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein S18 [Source:HGNC Symbol;Acc:10401]

Genomic region (view in browser)





>retro_mputfur_687
GGATTGCTAAAGATAGCTTTTGCCATCATTGCCAATAAGGCTGCAGGACAAAGATATTGC
TGTGTGGGGTTAAGGAACATAAACATTGATTCACAAAGAGAGGTCACTGAGGATGAAGTG
GAACTTGTGATCACCCTCATGGAGAACCTAAGCCAGAACAAGATCACAGACTGCTTCTGG
AAGATACAGAATGATATGAAGGATGGAAATTACATGCAGGTCCTGGCTCATGGCCTGGAA
AATAAGCTCTATAAACACCTGAAACAACTGAAGAAGATTCAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
GRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIR
G..KIAFAI.A.K..G.RY..V.LR...ID......E.TEDEVE.VIT.M.N..Q.KI.D.F...Q.D.KDG.Y.QVLA.GL.NKL...L..LKKI.
Retrocopy
GLLKIAFAIIANKAAGQRYCCVGLRNINIDSQR---EVTEDEVELVITLMENLSQNKITDCFWKIQNDMKDGNYMQVLAHGLENKLYKHLKQLKKIQ


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide