RetrogeneDB ID:
retro_mputfur_69
Organism:
Location:
GL897012.1:1708637-1709774 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
94.97 %
Coverage:
99.21 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_69
CAAGGATGGGAGTATGATGAGCTGCCCCACTACCCAGGCATTGTAGACAGCACTGCAGCC
CTGGCTGGCTTCTTAGAGGCACTGCCCTTGGCACTGAGAGCCCCCGGGCCTTATGGCCCC
CATTGGCCTCCCCAACCCCAGCCCCTGGGCTTGGACAGTGATGGCCTGAGGAGGGAGAAG
GATGAGATCTACAGACACCCACTCTTCCCACTGCTGGCCCTGGTCTTTGAGAAATGTGAA
TTGGCCACGTGCTCCCCCCGGGATGGGGCCGGTACTGGGCTGGGCACACCTCCAGGTGAT
GACGTATGCTCCTCTGATTCCTTCAACGAGGACATTGCTGCCTTTGCCAAGCAGGTGCGC
TCTGAGAGGCCCCTCTTCTCCTCCAACCCGGAGCTGGACAATCTGATGATACAGGCCATC
CAGGTGCTCCGTTTCCACCTGCTGGAGCTGGAGAAGGTCCACGACCTGTGCGACAACGTC
TGTCACCGCTACATCACCTGCCTCAAGGGAAAGATGCCCATCGACCTGGTCATCGAGGAT
CGGGACGGTGGCTGCAGGGAGGACCTCGAGGACTACCCGGCCTCCTGCCCCAGCCTCCCG
GATCAGAATAATATGTGGATGAGAGACCATGAGGACAGCGGGTCTGTACATTTGGGGACC
CCGGGACCATCCAGTGGGGGCCTAGCCTCCCAGAGTGGGGACAACTCCAGTGACCAAGGA
GATGGACTAGACACAAGTGTGGCCTCTCCCAGTTCCGGGGGAGAGGACGAGGAGCTGGAC
CAGGAGCGGCGGCAGAATAAGAAGAGGGGGATCTTCCCCAAGGTGGCTACTAACATCATG
AGAGCATGGCTGTTCCAGCACCTCTCGCACCCATACCCCTCGGAGGAGCAGAAGAAGCAG
CTGGCGCAGGACACCGGGCTCACGATCCTGCAAGTCAACAACTGGTTCATCAACGCCCGG
AGACGCATCGTGCAACCAATGATTGATCAATCCAACCGCACAGGGCAGAGTGCAGCCTTC
AGCCCAGAGGGCCAGCCCATGGGGGGCTACACGGAAGCTCAGCCACACATGACTGTCAGG
CCTCCAGGGTTGATGGGAATGAGTTTGAACTTAGAAGGAGAGTGGCATTATCTATAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
QYDELPHYPGLVDSTAALAGFPEAVPSAPRAPGPYGPHRPPQPQPLGLDSDGLRREKDEIYGHPLFPLLALVFEKCELATCSPRDGASTGLGTPPGGDVC
.YDELPHYPG.VDSTAALAGF.EA.P.A.RAPGPYGPH.PPQPQPLGLDSDGLRREKDEIY.HPLFPLLALVFEKCELATCSPRDGA.TGLGTPPG.DVC
Retrocopy
EYDELPHYPGIVDSTAALAGFLEALPLALRAPGPYGPHWPPQPQPLGLDSDGLRREKDEIYRHPLFPLLALVFEKCELATCSPRDGAGTGLGTPPGDDVC


Parental protein
SSDSFNEDIAAFAKQVRSERPLFSSNPELDNLMIQAIQVLRFHLLELEKVHDLCDNFCHRYITCLKGKMPIDLVIEDRDGGCREDLEDYPASCPSLPDQN
SSDSFNEDIAAFAKQVRSERPLFSSNPELDNLMIQAIQVLRFHLLELEKVHDLCDN.CHRYITCLKGKMPIDLVIEDRDGGCREDLEDYPASCPSLPDQN
Retrocopy
SSDSFNEDIAAFAKQVRSERPLFSSNPELDNLMIQAIQVLRFHLLELEKVHDLCDNVCHRYITCLKGKMPIDLVIEDRDGGCREDLEDYPASCPSLPDQN


Parental protein
NMWIRDHEDSGSVHLGTPGPSSGGLASQSGDNSSDQGDGLDTSVASPSSGGEDEELDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQ
NMW.RDHEDSGSVHLGTPGPSSGGLASQSGDNSSDQGDGLDTSVASPSSGGEDEELDQERR.NKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQ
Retrocopy
NMWMRDHEDSGSVHLGTPGPSSGGLASQSGDNSSDQGDGLDTSVASPSSGGEDEELDQERRQNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQ


Parental protein
DTGLTILQVNNWFINARRRIVQPMIDQSNRTGQSAAFSPEGQPMGGYTEAQPHMTVRPPVYLWSMGMSLNLEGEWHYL
DTGLTILQVNNWFINARRRIVQPMIDQSNRTGQSAAFSPEGQPMGGYTEAQPHMTVRPP......GMSLNLEGEWHYL
Retrocopy
DTGLTILQVNNWFINARRRIVQPMIDQSNRTGQSAAFSPEGQPMGGYTEAQPHMTVRPPGLM---GMSLNLEGEWHYL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide