RetrogeneDB ID:
retro_mputfur_693
Organism:
Location:
GL896936.1:3658417-3658728 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
66.67 %
Coverage:
97.14 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
TXN
Parental gene aliases:
No gene alias available
Parental gene description:
thioredoxin [Source:HGNC Symbol;Acc:12435]

Genomic region (view in browser)





>retro_mputfur_693
ATGGTGAAGCAGATTGAGAGCAAGTATGCTTTTCAGGACGCCTTGAACTGTGCAGGAGAC
AAACCTGTTGCTGTTGACTTCTCATTCACATGTAGTGGACTTGGCAAAATGATCAAGCCT
TTCTTCATTCCTTCTCTGAAAAGTATTCCAACATGATGTTCCTTGAAGCAGATAGGAATG
ACTGTCAGGATGTTGCTTTAGAATGTGGAGTCAAATGCATGCCAGCTTCCAGTTTTGTTT
TTTTTTTGAAAGGACAAAAGGTGGTTGGATTTTCTGGAATTAATAAAGAAATTCTTAAAG
AATGAATTAAT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MVKQIESKIAFQEALVGAGDKLVVVDFSATWCGPCKMIKPFF-HSLSEKYSNVVFLEVDVDDCQDVASECEVKCMPT--FQFFKKGQKVGEFSGANKEKL
MVKQIESK.AFQ.AL..AGDK.V.VDFS.T..G..KMIKPFF.HS.SEKYSN..FLE.D..DCQDVA.EC.VKCMP........KGQKV..FSG.NKE.L
Retrocopy
MVKQIESKYAFQDALNCAGDKPVAVDFSFTCSGLGKMIKPFF/HSFSEKYSNMMFLEADRNDCQDVALECGVKCMPASXXXXXXKGQKVVGFSGINKEIL


Parental protein
EATIN
...IN
Retrocopy
KE*IN


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide