RetrogeneDB ID:
retro_mputfur_699
Organism:
Location:
GL896937.1:4271543-4272024 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
96.89 %
Coverage:
100.0 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
RPL21
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L21 [Source:HGNC Symbol;Acc:10313]

Genomic region (view in browser)





>retro_mputfur_699
ATGACCAACACAAAGGGAAAGAGGAGAGGTACCCAGTACATGTTCTCTAGGCCTTTTAGA
AAACATGGAGTTGTTCCTTTGGCCACATACATGCAAATCTACAAGAAAGGTGATATTGTG
GACATCAAGGGAATGGGCACTGTTCAAAAGGGAATGCCCCACAAATGTTACCATGGCAAA
ACTGGAAGAGTCTACAATGTTACTCAGCATGCTGTTGGTATTGTTGTAAACAAACAAGTT
AAGGGCAAGATTCTTGCCAAGAGAATTAATGTCCGCATTGAGCATATTAAACGTTCAAAG
AGCCGAGATAGCTTTCTGAATCGTGTCAAGGAAAATGATCAGAAAAAAGAAGGAAGCCAA
AGAGAAAGGTACTTGGGTTCAGCTGAAACGTCAGCCTGCTCCACCCAGAGAAGCACATTT
CGTGAGAACCAATGGAAAAGAGCCCGAACTGCTAGAACCCATTCCCTATGAATTCATGGC
A


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSK
MTNTKGKRRGT.YMFSRPFRKHGVVPLATYM.IYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIK.SK
Retrocopy
MTNTKGKRRGTQYMFSRPFRKHGVVPLATYMQIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKRSK


Parental protein
SRDSFLKRVKENDQ-KKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA
SRDSFL.RVKENDQ.KKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA
Retrocopy
SRDSFLNRVKENDQ\KKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide