RetrogeneDB ID:
retro_mputfur_701
Organism:
Location:
GL896937.1:11158759-11159119 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
100.0 %
Coverage:
74.53 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
RPS16
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein S16 [Source:HGNC Symbol;Acc:10396]

Genomic region (view in browser)





>retro_mputfur_701
AGGGGCAACGGCCTCATCAAGGTGAATGGGCGGCCCCTGGAGATGATCGAACCCCGCACG
CTACAATACAAGCTGCTGGAACCTGTTCTGCTTCTAGGCAAGGAGCGATTTGCTGGGGTG
GACATCCGAGTCCGAGTGAAGGGTGGTGGTCACGTGGCCCAGATTTATGCAATCCGCCAA
TCCATCTCCAAAGCCCTGGTGGCCTATTACCAGAAATACGTGGATGAGGCTTCCAAGAAG
GAGATCAAAGACATCCTCATCCAGTATGACCGGACCCTGTTGGTAGCTGATCCCCGGCGC
TGCGAATCCAAAAAGTTTGGTGGTCCTGGTGCCCGTGCTCGCTACCAGAAGTCCTATCGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
RGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRR
RGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRR
Retrocopy
RGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRR


Parental protein
CESKKFGGPGARARYQKSYR
CESKKFGGPGARARYQKSYR
Retrocopy
CESKKFGGPGARARYQKSYR


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide