RetrogeneDB ID:
retro_mputfur_702
Organism:
Location:
GL896937.1:2780295-2780820 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
73.14 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_702
ATGAGCTCCCAGATTTGTCAGAATTATTCCACTGAGGTGGAGGCTGCTGTCAGCCACCTG
GTCAATGTGCATGTGTGTACCTCCTATACTTACCTCTCTCTGGGCTTCTATTTCAACTGT
GAAGATGTGGCTCTGGAGGGCACAGGCCCCTTCTTCTACAAGTTGGCTGAGGAGAAGCAA
GAGGACACTGAGCATCTCTTGAAGATGCAAAATGGTGGTGGTGGCAGTGCCCTCTTCCAG
GATGTACAGAAGCTATCCTAAGATGAGTTGGGTAAAACCCTGGATGTCATGGAAGCTGCC
CCGGTTCTGGAGAAGAACCTGAACCAGGCCCTTTTAGAGCTGCATGCTCTGGGCTCTGCC
AACACAGAACCCCATCTCTCTGACCTCTTAGAAAACGACTTCCTGGGTGAGGAAGTGAAA
TTCGACAAGAAGATGGACAACCTCCTGTCTAACCTTTGCTGTGTGGCTGTCCCCCAGGCT
GGGCTGGATGAGTATCTTTTTGAAAGGCTCTCCCTCAAGCACAAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MSSQIRQNYSTEVEAAVNRLVNMHLRASYTYLSLGFYFDRDDVALEGVGHFFRELAEEKREGAERLLKMQNQRGGRALFQDVQKPSQDEWGKTLDAMEAA
MSSQI.QNYSTEVEAAV..LVN.H...SYTYLSLGFYF...DVALEG.G.FF..LAEEK.E..E.LLKMQN..GG.ALFQDVQK.S.DE.GKTLD.MEAA
Retrocopy
MSSQICQNYSTEVEAAVSHLVNVHVCTSYTYLSLGFYFNCEDVALEGTGPFFYKLAEEKQEDTEHLLKMQNGGGGSALFQDVQKLS*DELGKTLDVMEAA


Parental protein
LVLEKSLNQALLDLHALGSARTDPHLCDFLENHFLDEEVKLIKKMGDHLTNLRRLAGPQAGLGEYLFERLTLKHD
.VLEK.LNQALL.LHALGSA.T.PHL.D.LEN.FL.EEVK..KKM...L.NL...A.PQAGL.EYLFERL.LKH.
Retrocopy
PVLEKNLNQALLELHALGSANTEPHLSDLLENDFLGEEVKFDKKMDNLLSNLCCVAVPQAGLDEYLFERLSLKHN


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide