RetrogeneDB ID:
retro_mputfur_709
Organism:
Location:
GL896938.1:6275497-6275727 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
67.09 %
Coverage:
68.42 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
RPLP1
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein, large, P1 [Source:HGNC Symbol;Acc:10372]

Genomic region (view in browser)





>retro_mputfur_709
TTAAATGCTGAACCTTTCTGGCCAGGCTTCTTTGGAAAGGCCCTGGCCGGTGGTCGCATT
GGGAGCCTCATCTCAATGTAGGGGCTGGTGGACCTGCCCCAGCGGCTCACGCTGCACCAG
CCAAGGTCCTGCCCTGTCCACCAGTGTCTGCCGCTGCTGAGAAAAAACGGGAAGCAAAGC
AAGAAGAACCCAATGAGTCTCATGATGACATGGGCTTTGGTCTTTTTGAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
VNVEPFWPGLFAKALANVNIGSLIC-NVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD
.N.EPFWPG.F.KALA...IGSLI..NVGAGGPAPAA.AAPA....P......A.EKK.EAK.EE..ES.DDMGFGLFD
Retrocopy
LNAEPFWPGFFGKALAGGRIGSLIS/NVGAGGPAPAAHAAPAK-VLPCPPVSAAAEKKREAKQEEPNESHDDMGFGLFD


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide