RetrogeneDB ID:
retro_mputfur_714
Organism:
Location:
GL896940.1:1669465-1669771 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
75.96 %
Coverage:
80.31 %
Frameshifts:
2
Stop codons:
0


Parental gene:
Parental gene symbol:
NUTF2
Parental gene aliases:
No gene alias available
Parental gene description:
nuclear transport factor 2 [Source:HGNC Symbol;Acc:13722]

Genomic region (view in browser)





>retro_mputfur_714
GACAGGAACCAACTGGGAACAATTTATATTGACCCATCATGCCTTACATGGGAGGGACAG
CAATTCCTGAGGAAAGCTGCCATTGTGGAGAGGTTGTCTAATCTTCCATTCCAGAAACCC
AGTGCAGCATCACAGTGCAGAACCAGCAGCCCATGCCAGATAGCTGCATCAACAGCATGG
TTGTGGGCCAGCTCAAGGCTGATGAAAACCCCAATGTGGGGTTCCACCAGATGTTCCCAT
TAAAGAACATTGCCAATGCTTGGCTTTGCACCAATCACATGTTCAAGGCTTTCCCTGCAC
AACTTC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
DRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQK-IQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMF-RLA
DR.QLG.IYID.SCLTWEGQQF..KAAIVE.LS.LPFQK..Q.SIT.Q..QP.PDSCI.SMVVGQLKADE.P..GFHQMF.LKNI..AW.CTN.MF.RL.
Retrocopy
DRNQLGTIYIDPSCLTWEGQQFLRKAAIVERLSNLPFQK/TQCSITVQNQQPMPDSCINSMVVGQLKADENPNVGFHQMFPLKNIANAWLCTNHMF\RLS


Parental protein
LHNF
LHNF
Retrocopy
LHNF


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide