RetrogeneDB ID:
retro_mputfur_725
Organism:
Location:
GL896941.1:10465174-10465960 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
91.6 %
Coverage:
99.62 %
Frameshifts:
0
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_725
GCTCGTGGTCCCAAGAAACATCTGAAGCATGTAGCAGCTCCAAAGCATTGGATGCTGGAT
AAACTGACTGGTGTGTTCGCTCCTCGCCCATCTACTGGTCCCCATAAGCTGTGAGAGTGT
CTCCCTCTCATCATTTTCTTAAGGAACAGACTTAAGTATGCCCTAACAGGAGATGAAGTA
AAAAAGATCTGTATGCAGCATTTTATTAAGATTGATGGCAAGGTCCGAAATGATATAACA
TACCCTGCTGGTTTTATGGATGTCATCAGCATTGACAAGACCGGAAAGAATTTCCATCTG
ATCTATGATACCAAGGGTTGCTTTGCTGTTCATCGGATTACACTCAAGGAGGCCAAGTAC
AAGTTGTGCAAAGTGATAAAGATCTTTGTGCAGACAAAAGGAATCCCCCACCCGGTGACT
CACGATGCTCGCACCATCTGCTATCCTGATCCCCTCATCAAGGTCAATGACACCATTCAG
ATTGATTTGGAAACCGGAAAGATTACTGATTTCATCAAGTTTGACACTGGTAATCTATGT
ATGGTGACTAGGGGTGCTAACCTGGGAAGAATTGGTGTGATCACCAACACAGAGACACAC
GCTGGTTCGTTTGATGTGGTTCACCTGAAAGATGCCAATGGCAACAGCTTTGCCACCCGA
CTCTCCAACATTTTTGTTATTGGCAAAGGCAACAAATCATGGATTTCTCTTCCCCGTGGA
AAGGGTATCCACTTCACCATTGCTGAAGAGAGAGACAAGAGACTGGTGGCCAAACAGAGC
AGTGGG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRL
ARGPKKHLK.VAAPKHWMLDKLTGVFAPRPSTGPHKL.ECLPLIIFLRNRLKYALTGDEVKKICMQ.FIKIDGKVR.DITYPAGFMDVISIDKTG.NF.L
Retrocopy
ARGPKKHLKHVAAPKHWMLDKLTGVFAPRPSTGPHKL*ECLPLIIFLRNRLKYALTGDEVKKICMQHFIKIDGKVRNDITYPAGFMDVISIDKTGKNFHL


Parental protein
IYDTKGRFAVHRITLEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERH
IYDTKG.FAVHRITL.EAKYKLCKV.KIFV.TKGIPH.VTHDARTI.YPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT.GANLGRIGVITN.E.H
Retrocopy
IYDTKGCFAVHRITLKEAKYKLCKVIKIFVQTKGIPHPVTHDARTICYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTRGANLGRIGVITNTETH


Parental protein
PGSFDVVHVKDANGNSFAPRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSSG
.GSFDVVH.KDANGNSFA.RLSNIFVIGKGNK.WISLPRGKGI..TIAEERDKRL.AKQSSG
Retrocopy
AGSFDVVHLKDANGNSFATRLSNIFVIGKGNKSWISLPRGKGIHFTIAEERDKRLVAKQSSG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide