RetrogeneDB ID:
retro_mputfur_728
Organism:
Location:
GL896941.1:8954672-8955161 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
95.71 %
Coverage:
79.13 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
BTF3
Parental gene aliases:
No gene alias available
Parental gene description:
basic transcription factor 3 [Source:HGNC Symbol;Acc:1125]

Genomic region (view in browser)





>retro_mputfur_728
AAGATGAAAGAAACTATCATGAACCAGGAGAAACTCGCCAAACTGCAAGCACAAGTGCGC
GTTGGTGGGAAAGGAACTGCTCGCCAAAAGATGAAGGTGGTTCATAGTACAGCTACAGCA
GATGATAAAAAACTTCAGTTCTCCTTAAAGAAGTTAGGGGTAAACAATATCTCTGGTATT
GAAGAAGTGGCTATGTTCACAAACCAAGGAACAGTGATCCACTTTAACAACCCCAAAGTT
CAGGCATCGCTGGCAGCGAACACTTTCACCATTACAGGCCATGCTGAGACAAAGCAGCTG
ACAGAAATGCTACCCAGTATCTTAAACCAACTTGGTGCAGACAGTCTGACTAGTTTAAGA
AGACTGGCTGAAGCTCTGCCCAAACAATCTGTGGATGGAAAAGCACTACTTGCTACCGGA
GAGGATGATGATGATGAAGTTCCAGATCTTGTTGAGAATTTTGATGAAGCTTCCAAGAAT
GAAGCAAAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
QMKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQL
.MKETIMNQEKLAKLQAQVR.GGKGTAR.K.KVVH.TATADDKKLQFSLKKLGVNNISGIEEV.MFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQL
Retrocopy
KMKETIMNQEKLAKLQAQVRVGGKGTARQKMKVVHSTATADDKKLQFSLKKLGVNNISGIEEVAMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQL


Parental protein
TEMLPSILNQLGADSLTSLRRLAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDEASKNEAN
TEMLPSILNQLGADSLTSLRRLAEALPKQSVDGKA.LATGEDDDDEVPDLVENFDEASKNEAN
Retrocopy
TEMLPSILNQLGADSLTSLRRLAEALPKQSVDGKALLATGEDDDDEVPDLVENFDEASKNEAN


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide