RetrogeneDB ID:
retro_mputfur_73
Organism:
Location:
GL897038.1:2976692-2977712 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
94.41 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_73
ATGTTTACTGTTCATGAAGTTATCTGCAAGCTCAGCTTGGAGGGGGATCACTCCATGCCC
CCAAGTACATATGGGTCGGTCAAAGCATACACCAATTTTGATGCTGAGCATGATGCTCTG
AACATTGAAACGGCCATCAAGACCAAAGGTGTGGATGAGGTCATCATTGTCAACATTTTG
ACCAACCGCAGCAATGAACAGAGACAGGATATTGCCTTCGCCTACCAGAGAAGGACCAAA
AAGGAACTTGCATCAGCGCTGAAATCAGCCTTGTCTGGCCACCTAGAGACAGTGATTTTG
GACCTATTAAAAACATCTGCTCAATATGACACTTCTGAGCTGAAAGCCTCCATGAAGGGA
CTGAGGACTGATGAGGACTCCCTCATTGAGATCATCTGCTCAAGGACCAACCAAGAGCTT
CAGGAAATTAACAGAGTCTACAAGGAAATGTACAAGACTGATCTGGAGAAGGACATCGTT
TCTGATACATCTGGTGACTTCCGCAAGCTGATGGTTGCCCTTGCAAAGGGTAGAAGAGCA
GAGGATGGCTCTGTCATTGATTATGAACTGATTGACCAAGATGCCTGGGATCTCTACGAT
GCCGGAGTGAAGAGGAAAGGAACTGATGTACCCAAGAGGATCAGCATCATGACTGAGCAC
AGTGTGTGTCATCTCCAGAAAGTATTTGATAGGTACAAGAGCTACAGCCCTTATGACATG
TTGGAGAGCCTCAAGAAGGAGGTCAAAGGAGACCTGGAAAATGCTTTCCTAAACCTGGTC
CAGTGCATTCAGAATAAGCCCTTGTATTTTGCTGACCAGCTGTACGACTCCATGAAGGGC
AAGGGGACTCGTGATAAAGTTCTGATTAGAATCATGGTCTCTCGCAGTGAAGTGGACCTG
TTGAAAATTAGGTCTGAATTCAAGAGAAAGTATGGCAAGTCTCTGTATTACTACATCCAG
CAAGACACGAAGGGCGACTACCAGAAAGCGCTGCTGTACCTGTGTGGTGGGAATGACTGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MSTVHEILCKLSLEGDHSTPPSAYGSVKAYTNFDAERDALNIETAIKTKGVDEVTIVNILTNRSNEQRQDIAFAYQRRTKKKELASALKSALSGHLETVI
M.TVHE..CKLSLEGDHS.PPS.YGSVKAYTNFDAE.DALNIETAIKTKGVDEV.IVNILTNRSNEQRQDIAFAYQRRTKK.ELASALKSALSGHLETVI
Retrocopy
MFTVHEVICKLSLEGDHSMPPSTYGSVKAYTNFDAEHDALNIETAIKTKGVDEVIIVNILTNRSNEQRQDIAFAYQRRTKK-ELASALKSALSGHLETVI


Parental protein
LGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIVSDTSGDFRKLMVALAKGRRAEDGSVIDYELIDQDARDLY
L.LLKT.AQYD.SELKASMKGL.TDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIVSDTSGDFRKLMVALAKGRRAEDGSVIDYELIDQDA.DLY
Retrocopy
LDLLKTSAQYDTSELKASMKGLRTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIVSDTSGDFRKLMVALAKGRRAEDGSVIDYELIDQDAWDLY


Parental protein
DAGVKRKGTDVPKWISIMTERSVCHLQKVFDRYKSYSPYDMLESIKKEVKGDLENAFLNLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVD
DAGVKRKGTDVPK.ISIMTE.SVCHLQKVFDRYKSYSPYDMLES.KKEVKGDLENAFLNLVQCIQNKPLYFAD.LYDSMKGKGTRDKVLIRIMVSRSEVD
Retrocopy
DAGVKRKGTDVPKRISIMTEHSVCHLQKVFDRYKSYSPYDMLESLKKEVKGDLENAFLNLVQCIQNKPLYFADQLYDSMKGKGTRDKVLIRIMVSRSEVD


Parental protein
MLKIRSEFKRKYGKSLYYYIQQDTKGDYQKALLYLCGGDD
.LKIRSEFKRKYGKSLYYYIQQDTKGDYQKALLYLCGG.D
Retrocopy
LLKIRSEFKRKYGKSLYYYIQQDTKGDYQKALLYLCGGND


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide