RetrogeneDB ID:
retro_mputfur_733
Organism:
Location:
GL896942.1:8407316-8407757 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
52.0 %
Coverage:
53.05 %
Frameshifts:
2
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_733
ATGTCGGGAATCCTTCATATCCTGCAAATGGAGGAGGATGTCCTCAAATTCCTTGCAGCG
GACACCCACTTCAGCAGCACCAACCTTGACTTCCAAACAGAACAATAATCTACCAAAGTA
AAAGTAACGGCATCCATACCATAAAATCTGAAGAGACCCTGAGAGAAGCTCCCGCCGGTA
ACTCCTGCCGTCGTTGGCGTCGGAAACCCTGCTGACGTCAGCGTTGTATGCCCCAGGGCT
ACGTGGCAGCGAGGTGAGCTGGCCTCTGTTGCTACCACTGGAGCTACTACTACCACTGGC
TGCTTCACTTGTGGAAATTTCACTAACTGGATCCAGACTGCGACTTCTGGTGGTTACTTA
AGGGCTAACCACTGTCTCCGCAAAGAGCACTTGATATTAACCTGCGTATCACAGCTCTGT
ATAACCCTGACACTCCTCTGC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQ-YIYKRKSDGIYII-NLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATP
MSG.L..LQM.EEDVLKFLAA.TH...TNLDFQ.EQ..IY..KS.GI..I.NLKR..EKL.....A.V...NPADVSV...R.T.QR..L...A.TGAT.
Retrocopy
MSGILHILQM-EEDVLKFLAADTHFSSTNLDFQTEQ/IIYQSKSNGIHTI\NLKRP*EKLPPVTPAVVGVGNPADVSVVCPRATWQRGELASVATTGATT


Parental protein
IAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALC
..G.FT.G.FTN.IQ.A.....L......R..H..LT..S........LC
Retrocopy
TTGCFTCGNFTNWIQTATSGGYLRANHCLRKEHLILTCVSQLCITLTLLC


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide