RetrogeneDB ID:
retro_mputfur_741
Organism:
Location:
GL896943.1:4166278-4166589 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
51.35 %
Coverage:
61.14 %
Frameshifts:
4
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_741
CTGAGGGGCAGCCGGAGAGCTGAGGGTCCCCGGAAGACGAAGGCGCAGCACCAGCGCGGG
TCTGTGCCCTCTTCCAGGACGCGCAGAAGTTCTACCAGGGTCGGGGGGCATCCCTGGATG
CCAGGGAGCCGCCGTTGCTCTGGACAAGAGCCTGCAGCAGGCCCTTCCGAAGCTGCTTGC
CCTGGGGTCCGCCCGCGCACACGCCCGCTCTGTGACTTCCCGGAGAGCCGCTTCCTGGAG
GAGGAGGCGCAACTCCAAGGAGATGGCGACCACCTGACTACATGCGCAGGCTTCCACCCG
GGCGGGCTGGG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
LAEEKREGAERLLKMQNQRGGR-ALFQDVQKPSQDEWGKTLDAME-AALVLEKSLNQALLDLHALGSARTDPH-LCDFLENHFLDEEVKLIKKMGDHLTN
L....R....R..K.Q.QRG...ALFQD.QK..Q...G..LDA.E.AA..L.KSL.QAL..L.ALGSAR.....LCDF.E..FL.EE..L....GDHLT.
Retrocopy
LRGSRRAEGPRKTKAQHQRGSV/ALFQDAQKFYQGR-GASLDARE/AAVALDKSLQQALPKLLALGSARAHAR/LCDFPESRFLEEEAQL-QGDGDHLTT


Parental protein
-LRRLAGPQAG
..RRL....AG
Retrocopy
/MRRLPPGRAG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide