RetrogeneDB ID:
retro_mputfur_747
Organism:
Location:
GL896943.1:5768288-5768611 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
67.89 %
Coverage:
92.31 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
RPL36
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L36 [Source:HGNC Symbol;Acc:13631]

Genomic region (view in browser)





>retro_mputfur_747
GCGGCACTCATGGCTCTGCACTACTTTGTGGCCATGGGCCTCAACAAGGGCCACAAGGTG
ACTAAGAACATGAACAAACCTAGGCAAAAAAGATGCTGCAGGCACCTTATCAAGCACATC
AAGTTTATGCGGGACAGGATATGAGAGGTATGTGGCTTCACCCCACACAGCAGCATTCAA
TGGAGCTGCTCAATGTCTCCAAGGACAAGCACACCTTCAAGTTCATCAAGAAAAGGATGG
GGCTACATATTCAGGCCAAGAGGAAGAGAAAGGAGCTGAGCAATGTCCTGGAAGCCATGA
GGAAAGCAGCAGCCAAGAAGGAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SAAMALRYPMAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPY-ERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAA
.A.MAL.Y..A.GLNKGHKVTKN..KPR..R....L.KH.KF.RD.I.EVCGF.P......MELL.VSKDK...KFIKKR.G.HI.AKRKR.ELSNVL.A
Retrocopy
AALMALHYFVAMGLNKGHKVTKNMNKPRQKRCCRHLIKHIKFMRDRI*EVCGFTPH/QQHSMELLNVSKDKHTFKFIKKRMGLHIQAKRKRKELSNVLEA


Parental protein
MRKAAAKKD
MRKAAAKKD
Retrocopy
MRKAAAKKD


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide