RetrogeneDB ID:
retro_mputfur_75
Organism:
Location:
GL897291.1:543201-543882 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
100.0 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_75
ATGTCATTCGTGGAGGGCGGGCGGCGCTCCGCTGCTCAGCGCCGACGTCTCGACACCCCT
GTCACGTTTTCCCGGCCCGCGTTTTCCACGTTCACTCAGGGGGATGGTTGGGGTGAGGGT
GAAGTGGACGAGGAGGACGGGTGCGACCAAGTGGCCCGTGATCTGCGGGCGGAGTTCTCG
GCCGGGGCGTCGTCGGAGCCTAGAAAGGGCTCTCTATTCCGGCGGGACGGGGACGGGTCT
CCGGTTCTGCCCGATAAGCGCAATGGCATTTTCTCGGCGGTTGCGGACGACGGAGCCCAG
GCTCGGCGGTGGCCGGTCCAGATCCTCTCAATTCTTTGTTCGCTGCTGTTCGCCATCCTC
CTCGCCTTCCTCCTCGCCATCGCCTACCTGATCGTAAAAGAGTTGCATGCTGAGAATTTA
AAGACTGAAGAGGACATAGACACTGGGCTACTAGGATTCTGGACTCTACTTATAATATCT
CTATCTGCTGGATTCTCCTGCTGTAGCTTTTCTTGGACCGTGACTTATTTTGATTCTTTT
GAACCAGGAATGTTTCCTCCTACTCCTCTTTCACCAGCCAAGTTCAAGAAACTGACTGGA
CATTCTTTCCACATGGGCTATAGCATGGCAATTTTGAATGGCGTTGTTGCTGCTCTTACT
GTAGCATGGTGCCTCATGTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MSFVEGGRRSAAQRRRLDTPVTFSRPAFSTFTQGDGWGEGEVDEEDGCDQVARDLRAEFSAGASSEPRKGSLFRRDGDGSPVLPDKRNGIFSAVADDGAQ
MSFVEGGRRSAAQRRRLDTPVTFSRPAFSTFTQGDGWGEGEVDEEDGCDQVARDLRAEFSAGASSEPRKGSLFRRDGDGSPVLPDKRNGIFSAVADDGAQ
Retrocopy
MSFVEGGRRSAAQRRRLDTPVTFSRPAFSTFTQGDGWGEGEVDEEDGCDQVARDLRAEFSAGASSEPRKGSLFRRDGDGSPVLPDKRNGIFSAVADDGAQ


Parental protein
ARRWPVQILSILCSLLFAILLAFLLAIAYLIVKELHAENLKTEEDIDTGLLGFWTLLIISLSAGFSCCSFSWTVTYFDSFEPGMFPPTPLSPAKFKKLTG
ARRWPVQILSILCSLLFAILLAFLLAIAYLIVKELHAENLKTEEDIDTGLLGFWTLLIISLSAGFSCCSFSWTVTYFDSFEPGMFPPTPLSPAKFKKLTG
Retrocopy
ARRWPVQILSILCSLLFAILLAFLLAIAYLIVKELHAENLKTEEDIDTGLLGFWTLLIISLSAGFSCCSFSWTVTYFDSFEPGMFPPTPLSPAKFKKLTG


Parental protein
HSFHMGYSMAILNGVVAALTVAWCLM
HSFHMGYSMAILNGVVAALTVAWCLM
Retrocopy
HSFHMGYSMAILNGVVAALTVAWCLM


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide