RetrogeneDB ID:
retro_mputfur_751
Organism:
Location:
GL896944.1:12576485-12576859 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
69.53 %
Coverage:
100.0 %
Frameshifts:
1
Stop codons:
2


Parental gene:
Parental gene symbol:
C3orf14
Parental gene aliases:
No gene alias available
Parental gene description:
chromosome 3 open reading frame 14 [Source:HGNC Symbol;Acc:25024]

Genomic region (view in browser)





>retro_mputfur_751
ATGACTTCCTTATTTGGTTCAGAAATTCTCCTTTCAAAAAGACATGAAGAAACAGTATCA
TAAAGATTATTACTTTGACAAACGGAGAATAAATCTGTAGATGAAAACAAGGAAAAGGCA
TCTCAGATGCAAACATCTGAGACTAGATTAAAAGGTACCTTAGTCTTTTAAAGGATATAG
AAGCAGGAGAGAAGTGTTTCCAGACCCAGACTGACCCGATTCCACCACCAGAGGTGGTTT
CTCTTGAGACTCTTCACTGGGCATCAAAAGAGTATATTCTCAAATGGGATCAGTTTCTTT
TAGGAAGAGCACCATATCCTACTGGTGTTGAAAATGAAAATGACATAGGAAGTACTATTC
AAGATGAGGCGCGG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MTSLFAQEIHLSKRHEEIVSQRLMLLQQMDNKFIDENKGKASQMQAAETAFK-RNLSLLMDIEAAEKSLQTRIHPIPSPEVVSLETLYWASVEEYIPKWE
MTSLF..EI.LSKRHEE.VS.RL.LL.Q..NK..DENK.KASQMQ..ET..K.R.LSLL.DIEA.EK..QT...PIP.PEVVSLETL.WAS..EYI.KW.
Retrocopy
MTSLFGSEILLSKRHEETVS*RL-LL*QTENKSVDENKEKASQMQTSETRLK/RYLSLLKDIEAGEKCFQTQTDPIPPPEVVSLETLHWAS-KEYILKWD


Parental protein
QFLLGRAPYPIGVENENEAENTVQNEAQ
QFLLGRAPYP.GVENEN....T.Q.EA.
Retrocopy
QFLLGRAPYPTGVENENDIGSTIQDEAR


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide