RetrogeneDB ID:
retro_mputfur_76
Organism:
Location:
GL896905.1:12667604-12668012 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
66.67 %
Coverage:
97.78 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
RPL32
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L32 [Source:HGNC Symbol;Acc:10336]

Genomic region (view in browser)





>retro_mputfur_76
ACAGTCACCCTCAGACCTCTGCCAAAGCCCAAGACTATCAAAAAGAGGACCAAGATGTTC
CTCTGGCACCAGTCAGACCCATATGTAAAAATTAAGCTCAACTGGCAGAAACCCCGAGGC
ACTGACAAAAGGGTGCACAAAAGATTTAAGAGCCAGATCTTGATGCCCAACCCTGGTTAT
GGGAGCGACAAGAAAACAGAGCACAGGCTGCCCAATGGCTTCCAGAAGTCCCCAGCCCAC
AGCATGAAGGAGCTTGAAGGACTGCTGGTGTGCAACAAATCTCAGTATGCGGGGTCTGCT
GACAATGTCTTGACCAAGAACCATAAGACTACTGCAGAAAGAGCAGCCCCGCTGGCCCCC
AAAGTCGCCAATCCCAATGCCAGGCTGCGCAGGAAAGAAAATGAATAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
LRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNV
LRPL.KPK..KKRTK.F..HQSD.YVKIK.NW.KPRG.D.RV..RFK.QILMPN.GYGS.KKT.H.LP.GF.K...H..KELE.LL.CNKS..A..A.NV
Retrocopy
LRPLPKPKTIKKRTKMFLWHQSDPYVKIKLNWQKPRGTDKRVHKRFKSQILMPNPGYGSDKKTEHRLPNGFQKSPAHSMKELEGLLVCNKSQYAGSADNV


Parental protein
SSKNRKAIVERAAQLAIRVTNPNARLRSEENE
..KN.K...ERAA.LA..V.NPNARLR..ENE
Retrocopy
LTKNHKTTAERAAPLAPKVANPNARLRRKENE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide