RetrogeneDB ID:
retro_mputfur_762
Organism:
Location:
GL896945.1:11819713-11820566 (+)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
96.14 %
Coverage:
100.0 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
NTAN1
Parental gene aliases:
No gene alias available
Parental gene description:
N-terminal asparagine amidase [Source:HGNC Symbol;Acc:29909]

Genomic region (view in browser)





>retro_mputfur_762
GAGGAAAGAGCCAGACTTCTTAGAGGTCAGTCTGTTCAACAAGTGGGACCCCAGGGCCTT
CTGTATGTTCAGCAAAGAGAGCTGGCAGTGACCTCCCCAAAGGATGGCTCCATCTCCATT
CTGGGTTCTGATGATGCCACCACTTGTCACATCATGGTCCTGAGGCACACAGGTAACGGG
GCCACCTGCTTGACCCACTGCGATGGAACGGACACCAGAGCAGAGGTGCCCTTGATCATG
AGCTCCATAAAGTCCTTCTCTGATCACGCCCAGTGTGGAAGACTGGAGGTGCACCTCGTG
GGAGGCTTCAGTGACGACAGGCAGTTGTCACAAAAACTTACTCATCAGCTTCTTAGTGAA
TTTGACAGACAGGAGGAGGACGTTCACTTAGTGACGTTATGTATGACAGAATTAAATGAC
CGGGAAGAAAATGAAAACCACTTTCCAATCATTTACGGCATCGCTGTGAACATCAAGACC
GCGGAGATTTACCGAGCATCCTTCCTAGACCCGGGCCCGGAGGAGGCGCTGCGGGCTGCC
CGGGCTTTAACAGGAGGACCAATGATTAGTATCTATGATGCAGAGACCGAACAGCTGTGT
CTGGGGCCGTACTCCTGGGTGCCCTTCCCGCACGTCGACTTCTGGCTACAGCAAGACGAC
AAGCAGATGCTAGAGAACCTTTCCACTTCGCCTCTGGCTGAGCCGCCCCACTTTGTGGCA
CATATTAGGTCTACCTTGATGTTTTTTAAAAAAACACCCATCTCCCACCAGCGCACTGTT
TCCTGGAAATAAGGCTCTGCTCTACAAAAAGAATGCAGGTGGCTTGTGGGAAAAGATCTC
TTCTCCCGGAAGC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
QERARLLRGQSVQQVGPQGLLYVQQRELAVTSPKDGSISILGSDDATTCHIVVLRHTGNGATCLTHCDGTDTRAEVPLIMSSIKSFSDHAQCGRLEVHLV
.ERARLLRGQSVQQVGPQGLLYVQQRELAVTSPKDGSISILGSDDATTCHI.VLRHTGNGATCLTHCDGTDTRAEVPLIMSSIKSFSDHAQCGRLEVHLV
Retrocopy
EERARLLRGQSVQQVGPQGLLYVQQRELAVTSPKDGSISILGSDDATTCHIMVLRHTGNGATCLTHCDGTDTRAEVPLIMSSIKSFSDHAQCGRLEVHLV


Parental protein
GGFSDDRQLSQKLTHQLLSEFDRQEEDVHLVTLCVTELNDREENENHFPIIYGIAVNIKTAEIYRASFPDRGPEEVLRAARALTGGPMISIYDAETEQLR
GGFSDDRQLSQKLTHQLLSEFDRQEEDVHLVTLC.TELNDREENENHFPIIYGIAVNIKTAEIYRASF.D.GPEE.LRAARALTGGPMISIYDAETEQL.
Retrocopy
GGFSDDRQLSQKLTHQLLSEFDRQEEDVHLVTLCMTELNDREENENHFPIIYGIAVNIKTAEIYRASFLDPGPEEALRAARALTGGPMISIYDAETEQLC


Parental protein
LGPYSWVPFPHADFWLQQDDKQILENLSTSPLAEPPHFVAHIRSTLM-FLKKHPSPTSALFPGNKALLYKKNAGGLWEKLSSPGS
LGPYSWVPFPH.DFWLQQDDKQ.LENLSTSPLAEPPHFVAHIRSTLM.FLKKHPSPTSALFPGNKALLYKKNAGGLWEK.SSPGS
Retrocopy
LGPYSWVPFPHVDFWLQQDDKQMLENLSTSPLAEPPHFVAHIRSTLM\FLKKHPSPTSALFPGNKALLYKKNAGGLWEKISSPGS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide