RetrogeneDB ID:
retro_mputfur_775
Organism:
Location:
GL896946.1:2728919-2729452 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
89.13 %
Coverage:
100.0 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
MREG
Parental gene aliases:
No gene alias available
Parental gene description:
melanoregulin [Source:HGNC Symbol;Acc:25478]

Genomic region (view in browser)





>retro_mputfur_775
AGTGATAGCAATCCATATTCTTCATTTGGAGCAACTCTGGTGAGAGACGATGACAAGAAT
TTGTAGAGCATGCCCCTGTCCCACACAGAGGCAGATGACGACAGAATCTTGTACAATCTG
ATAGTCGTTCGAAATCAGCAGGCCAAAGATTCAGAGGAGTGGCAAAAACTCAACTACGAT
ATCTACACCCTGCAGCAGATCCGGAGGGAAGTGAGAAATAGATGGAAACGCATCTTAGAG
GATTTAGGTTTTCAAAAGGAAGCTGACTCTTTGTTGTCCATGACGAAACTCAGCACCATT
AGTGATTCTAAAAACACAAGGAAGGCTCGGGAGATATTGTTAAAACTGGCTGAAGAAACC
AGTATTTTTCCAAGCTGGGAGCTCTCGGAGAGATACCTCTTTGTTGTGAACCGTCTCATT
GCTCTCCATGCAGCAGAAGAGTTCTTTAAAATCGCCAGTGGAACTTACCCCAAGAAGCCA
GGAGTCCCAAGCCTGGCCAGAAAGAACTGCACTACCTTCCGTTTCCAAGTCCC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SDSNPYSSFGATLARDDDKNLWSMPHDLSHTEADDDRILYNLIVVRNQQAKDSEEWQKLNYDIYTLRQIRREVRNRWKRILEDLGFQKEADSLLSVTKLS
SDSNPYSSFGATL.RDDDKNL.SMP..LSHTEADDDRILYNLIVVRNQQAKDSEEWQKLNYDIYTL.QIRREVRNRWKRILEDLGFQKEADSLLS.TKLS
Retrocopy
SDSNPYSSFGATLVRDDDKNL*SMP--LSHTEADDDRILYNLIVVRNQQAKDSEEWQKLNYDIYTLQQIRREVRNRWKRILEDLGFQKEADSLLSMTKLS


Parental protein
TISDSKNTRKAREILLKLAEETSIFPTSWELSERYLFVVDRLIALDAAEEFFKIASRTY-PKKPGVPSLADGQKELHYLPFPSP
TISDSKNTRKAREILLKLAEETSIFP.SWELSERYLFVV.RLIAL.AAEEFFKIAS.TY.P.....P....GQKELHYLPFPSP
Retrocopy
TISDSKNTRKAREILLKLAEETSIFP-SWELSERYLFVVNRLIALHAAEEFFKIASGTY/PQEARSPK--PGQKELHYLPFPSP


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide