RetrogeneDB ID:
retro_mputfur_78
Organism:
Location:
GL897022.1:2357271-2357655 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
84.38 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
Gm11808
Parental gene aliases:
No gene alias available
Parental gene description:
predicted gene 11808 [Source:MGI Symbol;Acc:MGI:3649356]

Genomic region (view in browser)





>retro_mputfur_78
ATGCAGATCTTCATGAAGACCCTGACAGGCAAGACCATCACCCTTGAGGTTGAGCCCAGC
GACACCATTGAGAATGTCAAAGCCAAAATCGAAGACAAGGAGGGCATCCCCCCTGATCAG
CAGTGTCTGATTTTTGTGGGCAAACAGCTGGAAGATGGCCGCGCTCTGTCAGATCACAAT
ATCCAGAAAGAGTCCGCCCTGCACCTGGAGCTTCGCCTCCGGGGTGGCATCGTGGAACCC
TCCCTCCGCCAGCTGGCCCAGAAATACAACTGGGACAAGAAGATCTGCCGCAAATGTTGT
GCTCACCTGCACTCCCGCGCTGTCAACTGTTGCAAGAAGTGCAGCCACACCAACAACCTG
CACCCCCAAAAGGAGGTCAAATAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCY
MQIF.KTLTGKTITLEVEPSDTIENVKAKI.DKEGIPPDQQ.LIF.GKQLEDGR.LSD.NIQKES.LHL.LRLRGGI.EPSLRQLAQKYN.DK.ICRKC.
Retrocopy
MQIFMKTLTGKTITLEVEPSDTIENVKAKIEDKEGIPPDQQCLIFVGKQLEDGRALSDHNIQKESALHLELRLRGGIVEPSLRQLAQKYNWDKKICRKCC


Parental protein
ARLHPRAVNCRKKKCGHTNNLRPKKKVK
A.LH.RAVNC..KKC.HTNNL.P.K.VK
Retrocopy
AHLHSRAVNC-CKKCSHTNNLHPQKEVK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide