RetrogeneDB ID:
retro_mputfur_782
Organism:
Location:
GL896947.1:6399788-6400343 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
97.84 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_782
ATGCTGACGCCGGCAAGCAAACTGAAGCGGGAGGACGGTCTCAAAGGGTCCCGGACATCA
GCCACGGCCTCCGACTCCACTCGGAGCGTGTCTGTGAGAGACAGGCTGCTTGTTAAAGAG
GTTGCGTAGCTTGAAGCTAATTTACCGTGTACATGTAAGGTGCATTTTCCTGATCCAAAC
AAGCTACATTGCTTTCAGCTAACTGTAACCCCAGATGAGGGTTACTACCAGGGTGGAAAA
TTTCAGTTTGAAACTGAAGTTCCTGATGCATACAACATGGTGCCTCCCAAAGTGAAATGC
CTGACCAGGATCTGGCACCCCAACATCACAGAGACAGGCGAAATATGTCTAAGTTTACTG
AGAGAACATTCGATTGACGGCACTGGCTGGGCTCCCACAAGGACATTAAAGGATGTTGTT
TGGGGATTAAACTCTTTGTTTACTGATCTTTTGAATTTTGATGATCCACTGAATATTGAG
GCTGCAGAACATCATTTGAGGGACAAGGAGAACTTCCGGAATAAAGTGGAAGACTACATG
AAGCGTTATGCCAGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MLTLASKLKREDGLKGSRTSATASDSTRRVSVRDRLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTVTPDEGYYQGGKFQFETEVPDAYNMVPPKVKC
MLT.ASKLKREDGLKGSRTSATASDSTR.VSVRDRLLVKEVA.LEANLPCTCKVHFPDPNKLHCFQLTVTPDEGYYQGGKFQFETEVPDAYNMVPPKVKC
Retrocopy
MLTPASKLKREDGLKGSRTSATASDSTRSVSVRDRLLVKEVA*LEANLPCTCKVHFPDPNKLHCFQLTVTPDEGYYQGGKFQFETEVPDAYNMVPPKVKC


Parental protein
LTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVEDYMKRYAR
LTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKE.FRNKVEDYMKRYAR
Retrocopy
LTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKENFRNKVEDYMKRYAR


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide