RetrogeneDB ID:
retro_mputfur_785
Organism:
Location:
GL896947.1:1434723-1435502 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
62.45 %
Coverage:
90.34 %
Frameshifts:
4
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_785
CCTCCTCAACAGAAGAAACTGAGACTGTCTCCTGACCCCAAGCTGGAGGCAACAACCAAT
CAGCACTTCCTGAAGGGAGAAAAAGAACAGCAAGAAGTCACTGAACATGTTGATGGAGTA
CAAAATGAAAAGGCAAGCTAGTGAGATTTTGAAAGTAGAGCCAAAGTATAACAAACTTGG
CCAAACAATTTTTTCAGAAGAGGTCATACTTGATTGCCAAAATCTAAAATTCTGGGGTAA
CAACATTTGTCAACCATCCACAAGTGTCTGCTGCTTAGAGAGGAGGAGGAAGAGGTGCTG
CCATATTTGACAAGAGTTGAAGTGACAGAATGTGAAGATATTAAATCAGGTTACAGAACA
GATTTTTATTTTGATGAAAACCCTTGCTTTGAAAATACAGTTCTGCCCAAAGAACTTCAT
CTGAATGAGAGTGGTGATCCATTTTCAAAGTCCACTGAAATCAAACGGAAATCTGGAAAG
TGGTCAAGGAAATGTTCAAGGCAAACACAGAGTCAAGCCAGCAGGAAGAGGCAGCATGAG
GAACCAGAGAGCTTCTTCACGGGTTCACTGACCAGAACTCTGATGCAGGTGCATACCAAT
TAGGAGAGGTCATCAGAGATGATATCTGGTCAAACCCATTAGAGTAGCACGTGGCTCCTG
ATATGGATGATGAAGGGGAAGGAGAAGATGATAACAAAGAGGAGGGACTGGAGGATACTG
ATGAAGGAGATGAAGATGAAGGTGAAGATGAAGGTGATGACGAGGAGAAGGAAGGAGAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
PPAPKPGQTSTSQHLHRGAEKEQQEAIEHIDEVQNEIDRL-NEQAS-EEILKVEQKYNKLRQP-FFQKRSELIAKIPNFWVTTFVNHPQVSA-LLGEEDE
PP..K....S....L................EV....D...NE.AS..EILKVE.KYNKL.Q..FFQKRS.LIAKI.N..VTTFVNHPQVSA.L..EE.E
Retrocopy
PPQQKKLRLSPDPKLEATTNQHFLKGEKEQQEVTEHVDGVQNEKAS\SEILKVEPKYNKLGQT\FFQKRSYLIAKI*NSGVTTFVNHPQVSA\LREEE-E


Parental protein
EALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESFFT-WFTD-HSDA
E.L.YLTRVEVTE.EDIKSGYR.DFYFDENP.FEN.VL.KE.HLNESGDP.SKSTEIK.KSGK...K.S.QTQ..ASRKRQHEEPESFFT..FTD..SDA
Retrocopy
EVLPYLTRVEVTECEDIKSGYRTDFYFDENPCFENTVLPKELHLNESGDPFSKSTEIKRKSGKWSRKCSRQTQSQASRKRQHEEPESFFT/GFTDQNSDA


Parental protein
GADELGEVIKDDIWPNPLQYYLVPDMDDEEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDD-EGE
GA..LGEVI.DDIW.NPL.....PDMDD.EGEGE.D......EEGLED.DE...........D...EGE
Retrocopy
GAYQLGEVIRDDIWSNPLE*HVAPDMDD-EGEGEDDN----KEEGLEDTDEXXXXXXXXXXXDEEKEGE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide