RetrogeneDB ID:
retro_mputfur_80
Organism:
Location:
GL897126.1:1013291-1013987 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
76.57 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_80
CAGGGCCACCCTTTATTCCAGACTCCGGTCGCTCTCCAGCCGCTGGTGCAGCCTCAACCC
TCTGTACAGCCTCAACCCTCGGAACCATCTCCTCAGCTACCCTCTGCCTCCGGGGCCAAC
CAACACCGGTTTTTGAGCTCAGCTCCCTGTTGCCAACCAACCATGAGCTGTCAGGTTCGC
CAGAATTACTCCACCGAGGTGGAGGCCTCCGTCAACTGCCTAGTCAACATGCATCTGCGG
GCCTCCAACACCTACCTCTCCCTGGGCTTCTACTTCGACTGCAGCGATGTGGCTCTGGAG
GGCTTGGGCCACTTCTTCCAAGAGTTGGCCCAGAAGAAGCTCGAAGGCGCCCAGAAGCTC
TTGATGTTGCAAGAACAGCGCAGCGGCAGCTCCCTCTTCCAGGACGTGCAGAAGCCGTCC
CACGACAAGTGGGGGAAAGCCCTGGACGCCATGGAAACCGCTGTGGTCCTGGAGAAGAAC
CTGAACGAGGCCCTTTTGGATCTGCACGCCCTGGCTTCCTCCCGTGCGGACACCCATCTC
TGTAACTTCCTGGAGAGCCACTTCCTGGGCGAGGAGGTGAAAATCATCAAGAAGATGGGC
GACCACCTGACAAACCTCCGCAGGGTGTCCTGCACCCAGGTCGGGCTGGGCGAGTATCTC
TTCGAAAGGCTCACCCTCAAGCGTGACTGTCAGCCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MSSQIRQNYSTEVEAAVNRLVNMHLRASYTYLSLGFYFDRDDVALEGVGHFFRELAEEKREGAERLLKMQNQRGGRALFQDVQKPSQDEWGKTLDAMEAA
MS.Q.RQNYSTEVEA.VN.LVNMHLRAS.TYLSLGFYFD..DVALEG.GHFF.ELA..K.EGA..LL..Q.QR.G..LFQDVQKPS.D.WGK.LDAME.A
Retrocopy
MSCQVRQNYSTEVEASVNCLVNMHLRASNTYLSLGFYFDCSDVALEGLGHFFQELAQKKLEGAQKLLMLQEQRSGSSLFQDVQKPSHDKWGKALDAMETA


Parental protein
LVLEKSLNQALLDLHALGSARTDPHLCDFLENHFLDEEVKLIKKMGDHLTNLRRLAGPQAGLGEYLFERLTLKHD
.VLEK.LN.ALLDLHAL.S.R.D.HLC.FLE.HFL.EEVK.IKKMGDHLTNLRR....Q.GLGEYLFERLTLK.D
Retrocopy
VVLEKNLNEALLDLHALASSRADTHLCNFLESHFLGEEVKIIKKMGDHLTNLRRVSCTQVGLGEYLFERLTLKRD


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide