RetrogeneDB ID:
retro_mputfur_806
Organism:
Location:
GL896950.1:7735166-7735420 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
69.77 %
Coverage:
53.12 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
RPL21
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L21 [Source:HGNC Symbol;Acc:10313]

Genomic region (view in browser)





>retro_mputfur_806
ACTCAGCGTGTCACTAACATTGTTGTAAACAAACCAGTTAAGAACAAGATCCTTGCCAAG
AAAATTAATGTACATATTGAGCATAGTAAGTCCTCCAAAAGAGGAGACAGTTTCCTGAAG
CCTGTAAAGGAAACTGATCAGAAAAAGAAGGAAGTCAAGAGAAAGGTATTTGGGTTCAAT
TTAACCACCAGCCTGCCCCACCCAGAGGAGTACATTTTGTGAGAACCAAAGAAAAGGAAC
TTGAGCTGTTGAAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
TQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK-EKGTWVQLKRQPAPPREAHFVRTNGKEPELLE
TQ....IVVNK.VK.KILAK.INV.IEH.K.SK..DSFLK.VKE.DQKKKE.K.EKG.WVQ...QPAPPR..HFVRT..KE.ELL.
Retrocopy
TQRVTNIVVNKPVKNKILAKKINVHIEHSKSSKRGDSFLKPVKETDQKKKEVK/EKGIWVQFNHQPAPPRGVHFVRTKEKELELLK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide