RetrogeneDB ID:
retro_mputfur_813
Organism:
Location:
GL896950.1:8606661-8607114 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
99.34 %
Coverage:
75.12 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
Pttg1
Parental gene aliases:
No gene alias available
Parental gene description:
pituitary tumor-transforming gene 1 [Source:MGI Symbol;Acc:MGI:1353578]

Genomic region (view in browser)





>retro_mputfur_813
GATACTCAAGCAGCCATACCTAGAGTTGCCAGAAAGGCTTTGGGAACTGTCAACAGAGCC
ACAGAAAATTCAGTAAAGACTAGTGGACCTCTCAAACAGAAGCAGCCAACCTTCTCTGCC
AAAAAGGTGACTGAGAAGACTGTCAAAGCAAAAAGCTCTGTTCCTGCCTCTGATGACACC
TACCCAGAAATAGAAAAATTCTTTCCCTTCAATCCTTTAGATTTTGAGAGTTTCGACCTG
CCTGAAGAACACCAGATTGCACACCTCCCCTTGAATGGAGTGCCTCTCATGATCCTTGAT
GAGGAGAGGGAGCTTGAAAAGCTGTTACACCTGGGCCCCCCTTCACCTCTGAAGATACCC
TCTCCACCATGGGAGTCTAATCTGTTGCAGTCTCCAAGTGTTCTGTCGACCCTGGATGTT
GAATTGCCACCTGTTTGCTATGACTTAGATATT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
DTQAAVPRVARKALGTVNRATENSVKTSGPLKQKQPTFSAKKVTEKTVKAKSSVPASDDTYPEIEKFFPFNPLDFESFDLPEEHQIAHLPLNGVPLMILD
DTQAA.PRVARKALGTVNRATENSVKTSGPLKQKQPTFSAKKVTEKTVKAKSSVPASDDTYPEIEKFFPFNPLDFESFDLPEEHQIAHLPLNGVPLMILD
Retrocopy
DTQAAIPRVARKALGTVNRATENSVKTSGPLKQKQPTFSAKKVTEKTVKAKSSVPASDDTYPEIEKFFPFNPLDFESFDLPEEHQIAHLPLNGVPLMILD


Parental protein
EERELEKLLHLGPPSPLKIPSPPWESNLLQSPSVLSTLDVELPPVCYDLDI
EERELEKLLHLGPPSPLKIPSPPWESNLLQSPSVLSTLDVELPPVCYDLDI
Retrocopy
EERELEKLLHLGPPSPLKIPSPPWESNLLQSPSVLSTLDVELPPVCYDLDI


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide