RetrogeneDB ID:
retro_mputfur_816
Organism:
Location:
GL896951.1:3436918-3437319 (+)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
63.24 %
Coverage:
82.82 %
Frameshifts:
1
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_816
ATGGCCAAATCTAAGAGCCACACCATGCACAACCAGTCCCAAAAATGGCACAGAAATGGT
GTCAAGAAATCCCAGTCACAAAGATGTAAGTCTTTTAAGGGGGCGCAGCTCAAGTTCCTG
AGAAACTTCCACACTGTCAAGAAGCACAAGAAGGGCTTGAAGAAGAAGCAGGCCAACAAT
GCCAAAGCCATGAGTACATATCTCCAGCCTATCAAGGCCCTGCTGAAGTTCTAAAAGGTC
AAGCCCAAGATCCCAATGGGCATCAACCACTAACTCCTTCAACGTGTCTACAATGTCCAG
TCCAAGCTCAGGAAATGTGCTCATACCACATCGCCAAGGGTGTCAGGCTCTGCCAGCCAA
AGGCCAAGGCCAAGGCTCAAACCAAGGCCCAGGCTGATGCA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKMQANNAKAMSARAEAIKALVKPKEVKPKIPKGGSRKLNRLAYIA
MAKSK.HT.HNQS.KWHRNG.KK..SQR..S.KG...KFLRN....KKH.KKGLKK.QANNAKAMS.....IKAL.K...VKPKIP.G....L....Y..
Retrocopy
MAKSKSHTMHNQSQKWHRNGVKKSQSQRCKSFKGAQLKFLRNFHTVKKH-KKGLKKKQANNAKAMSTYLQPIKALLKF*KVKPKIPMGINH*LLQRVYNV


Parental protein
HPKLGKRARA-RIAKGLRLCRPKSKAKAQTKAQASA
..KL.K.A....IAKG.RLC.PK.KAKAQTKAQA.A
Retrocopy
QSKLRKCAHT/HIAKGVRLCQPKAKAKAQTKAQADA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide