RetrogeneDB ID:
retro_mputfur_820
Organism:
Location:
GL896952.1:603628-603993 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
52.31 %
Coverage:
70.29 %
Frameshifts:
6
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_820
ATGAGCTCCCAGGTTCCTCAGGATTATTCCTTTCCGGTGGAGGCTGCCCTCAACCACTTG
ATAAACATATAACCACAGGAATCTACACTTACCTTTTTCTGGTCCGCTTCTATTCCTACC
ATGACAATATGGCTCTGGAGGGCATGGACACTTCTGTGAGATGGCCAAGGAAAAGGGCAA
AGGCTCCAGCATTTCTCTAAGATGCAAAACCAGCACAGCAGCAGCACAATTTTCCAGGAC
GTGCAGAGCCAGCCAAGGATAAGTGGGGTTAAAACCCTGGACACCACAGAAGCTGCCATA
GTCCTGGGTAAAAACCTCAAGTAGAGCTTTTGGATCTGCAGGTCTGAGGCTCTGCCCACG
CAGAT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MSSQIRQNYSTEVEAAVNRLVNMHLRAS-YTYLSL-GFYFDRDDVALEGV-GHFFRELAEEKREGA-ERLLKMQNQRGGRALFQDVQ-KPSQDEWG-KTL
MSSQ..Q.YS..VEAA.N.L.N.....S.YTYL.L..FY...D..ALEG..GHF..E.A.EK..G......KMQNQ......FQDVQ..P..D.WG.KTL
Retrocopy
MSSQVPQDYSFPVEAALNHLINI*PQES/YTYLFLVRFYSYHDNMALEGM/GHFC-EMAKEKGKGS/QHFSKMQNQHSSSTIFQDVQ/EPAKDKWG\KTL


Parental protein
DAMEAALVLEKSL-NQALLDLHALGSARTD
D..EAA.VL.K.L....LLDL...GSA..D
Retrocopy
DTTEAAIVLGKNL/QVELLDLQV*GSAHAD


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide