RetrogeneDB ID:
retro_mputfur_824
Organism:
Location:
GL896952.1:3034298-3034630 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
67.54 %
Coverage:
58.55 %
Frameshifts:
1
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_824
CTGAGTCTGTCTCCCAGAAAGGTTGGTGATGATCTCACCAAGACAACCAGTGATTGGAAG
GGTCTGAGGATAACAGTGAAAATGACCTTTCTGAACAGACAGGCCCTGATTGAAGTGATA
CTTTCTCCCTCTGCCTGATCATGAGAGCCCTCAAGAAACTGCCAAGAAACAGGGAGAGGC
AGAAAAACATTCAGCACAGGGGAAATACCACTTTTGATGGGATTGTCAACGTTGCCTGAC
AGGTGCAGCACTGATCTTTAGCCAGAGAATTCTCTGGAACCATTAAAAAGATCCTGGGGA
CTGCCCAATCTGTGGGCTGCCATGCTGATGGC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
LGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASA-LIIKALKEPPRDRKKQKNSAVKHSGNITFDEIVNIARQMRHRSLARELSGTIKE
L.LSP.KVGDD..K.T.DWKGLRITVK.T..NRQA.IEV..S.SA.LI..ALK..PR.R..QKN....H.GN.TFD.IVN.A.Q..H.SLARE.SGTIK.
Retrocopy
LSLSPRKVGDDLTKTTSDWKGLRITVKMTFLNRQALIEVILSPSA/LIMRALKKLPRNRERQKN--IQHRGNTTFDGIVNVA*QVQH*SLAREFSGTIKK


Parental protein
ILGTAQSVGCNVDG
ILGTAQSVGC..DG
Retrocopy
ILGTAQSVGCHADG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide