RetrogeneDB ID:
retro_mputfur_827
Organism:
Location:
GL896952.1:9064056-9064301 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
74.12 %
Coverage:
100.0 %
Frameshifts:
3
Stop codons:
3


Parental gene:
Parental gene symbol:
NDUFA4
Parental gene aliases:
No gene alias available
Parental gene description:
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa [Source:HGNC Symbol;Acc:7687]

Genomic region (view in browser)





>retro_mputfur_827
GTATTATGCCAGATCCTTTGTTAGGCCAAGAAGCATTTGAGCTTGAGCCCCTCTTCATAT
TTATTGAGGCAGGAGGTAGTGGAGTAGTGCTGTATGATCTTGCACCTGGCATTGTTCAAT
CCAGATGTCAGTTGGGATTGAAAAAATAACCCAGAACCCTGAGACAAACTGGGTCCCAAT
GATCAGTACAAGTTCTACTCAGTGAATATAGATTACAGCAAACTGAAGAAAAAGGTCCAG
ACTTC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MLRQIIGQAKKHPSLIP-LFVFIGAGGTGAALY-VLRLALFNPDVSWDRKNNPEPWNKLGPNDQYKFYSVNVDYSKLKK-EGPDF
.L.QI...AKKH.SL.P.LF.FI.AGG.G..LY..L.LALFNPDVSWD.KNNPEP..KLGPNDQYKFYSVN.DYSKLKK..GPDF
Retrocopy
VLCQILC*AKKHLSLSP/LFIFIEAGGSGVVLY\ILHLALFNPDVSWD*KNNPEP*DKLGPNDQYKFYSVNIDYSKLKK/KGPDF


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide