RetrogeneDB ID:
retro_mputfur_828
Organism:
Location:
GL896952.1:11709752-11710180 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
74.66 %
Coverage:
75.13 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_828
AAACTCACCGGTGGTGAAGGCAGAGTCACGTCTGCCCTAGCCCCATAGATCGGCCTGCTG
GGTGTATCTCCAAAAAACGTTGGTGATGACATCACCAAGGTAACCAGTGATTGGAAGATC
TAAAGATTACAGTGAAACGGCCCATTCAGAACAGACAAGCCCAGACTGAAGGGGTACCTT
CTGCCTGTGTCCTGATTATCAAAGCCCTCAAGGAACCACCAAGAGACAGCAAGAAACAGA
AAAACACTGAGCACAGTGGAAGTATCACTTTTGATGAGATTGTCAGTATTGGCCAACAGA
TGCAGCACCAATCTGTAGCCAGAGAACTCTCTGGAACCATTAAAGAGATCATGGGGATTG
CCCAATCTGTGGGCTGCCAAGTTGATGGTTGCCACCCTCATGACATTATAGATGACATCA
ACAGTGGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
RCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWK-GLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNSAVKHSGNITFDEIVNI
..TGGE...TSALAP.IG.LG.SPK.VGDDI.K.T.DWK..L.ITVK..IQNRQAQ.E.VPSA..LIIKALKEPPRD.KKQKN....HSG.ITFDEIV.I
Retrocopy
KLTGGEGRVTSALAP*IGLLGVSPKNVGDDITKVTSDWK/DLKITVKRPIQNRQAQTEGVPSACVLIIKALKEPPRDSKKQKNT--EHSGSITFDEIVSI


Parental protein
ARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSG
..QM.H.S.ARELSGTIKEI.G.AQSVGC.VDG.HPHDIIDDINSG
Retrocopy
GQQMQHQSVARELSGTIKEIMGIAQSVGCQVDGCHPHDIIDDINSG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide