RetrogeneDB ID:
retro_mputfur_83
Organism:
Location:
GL896900.1:5256052-5256904 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
98.23 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
Voltage-dependent anion channel 1 [Source:UniProtKB/TrEMBL;Acc:G9KX63]

Genomic region (view in browser)





>retro_mputfur_83
ATGGCTGTGCCTCCCACGTATGCTGATCTTGGCAAATCTGCCAGGGATGTCTTCACCAAG
GGTTATGGATTTGGCTTAATAAAACTTGACTTGAAAACAAAATCTGAGAATGGACTGGAA
TTTACAAGCTCAGGTTCAGCCAACACTGAGACCACCAAAGTGACGGGCAGTCTGGAAACC
AAGTACAGGTGGACCGAATATGGTCTGACGTTTACAGAGAAATGGAACACTGACAACACG
CTAGGCACAGAGATCACTGTGGAAGATCAGCTTGCACGTGGACTGAAGCTGACCTTTGAT
TCATCCTTCTCACCAAACACAGGGGAAAAAAATGCAAAAATCAAGACAGGGTATAAGCGG
GAGCACATCAACCTGGGCTGCGATGTGGATTTCGACATTGCCGGTCCTTCAGTCCAGGGT
GCCATGGTGCTGGGCTATGAAGGCTGCCTGGCTGGCTACCAGATGAATTTTGAGACTGCG
AAGTCTCGAGTGACCCAGAGCAACTTCGCGGTTGGCTACAAGACTGACGAGTTCCAGCTC
CACACTAATGTAAATGATGGGACAGAGTTTGGTGGCTCCATTTATCAGAAGGTGAACAAG
AAGTTAGAGACCGCTGTCAATCTGACCTGGACTGCAGGAAATAGTAACACTCGCTTTGGA
ATAGCAGCCAAATATCAGATCGACCCTGATGCCTGCTTCTCGGCTAAAGTGAACAACTCC
AGCCTGATAGGTTTAGGATACACTCAGACCCTAAAGCCAGGTATCAAACTGACACTATCA
GCTCTGCTGGATGGCAAGAATGTCAATGCTGGCGGCCACAAGCTTGGTCTAGGACTGGAA
TTTCAGGCATAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFD
MAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFD
Retrocopy
MAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFD


Parental protein
SSFSPNTGKKNAKIKTGYKREHINLGCDVDFDIAGPSVRGAVVLGYEGWLAGYQMNFETAKSRVTQSNFAVGYKTDEFQLHTNVNDGTEFGGSIYQKVNK
SSFSPNTG.KNAKIKTGYKREHINLGCDVDFDIAGPSV.GA.VLGYEG.LAGYQMNFETAKSRVTQSNFAVGYKTDEFQLHTNVNDGTEFGGSIYQKVNK
Retrocopy
SSFSPNTGEKNAKIKTGYKREHINLGCDVDFDIAGPSVQGAMVLGYEGCLAGYQMNFETAKSRVTQSNFAVGYKTDEFQLHTNVNDGTEFGGSIYQKVNK


Parental protein
KLETAVNLAWTAGNSNTRFGIAAKYQIDPDACFSAKVNNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGHKLGLGLEFQA
KLETAVNL.WTAGNSNTRFGIAAKYQIDPDACFSAKVNNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGHKLGLGLEFQA
Retrocopy
KLETAVNLTWTAGNSNTRFGIAAKYQIDPDACFSAKVNNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGHKLGLGLEFQA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide