RetrogeneDB ID:
retro_mputfur_834
Organism:
Location:
GL896954.1:5258793-5259119 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
59.65 %
Coverage:
74.83 %
Frameshifts:
4
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_834
GAAGAAGACGCCGGGCTTCCAGTGACCGTGACACAGGACGGCAGCCAGCACAGGCTTGGA
CAATTTATGAAAACCAAACAGACAGCCTTAGGACAGAATGTGGATCTAAATGCCCAGAAT
CACTCCCCTTTGTAAGATTTGTAACAAAAATTAATATGAATGGAGTAGTAGTTCTAATGA
GGTAGTCACCCAAGAGCCTCATCAGTGTGAAGAAAATGGCAGAATTCACATAGCATCGAA
GTTGTCCTATGAGACTTTTGGTGCCTACCAATGTCTAAAGAAAATATAAGACTCCCTCAG
CCACCGAAAGACGGTATTATAGCAAT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
EDDEDMTLT-RWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGV-NSSNGVV-DPRAISVLAKWQNSYSIKVVLQELRRLMMSKENM
E.D.....T.R.TG.......TIYEN...SL..ECG.K.PE..PFVRFVTKINMNGV..SSN.VV..PRA.SV..KWQNS.SI.VVL.....L.MSKEN.
Retrocopy
EEDAGLPVT/RDTGRQPAQAWTIYENQTDSLRTECGSKCPESLPFVRFVTKINMNGV/SSSNEVV/HPRASSV*RKWQNSHSIEVVL*DFWCLPMSKENI


Parental protein
KLPQPP-EGQCYSN
.LPQPP.E...YSN
Retrocopy
RLPQPP/ERRYYSN


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide