RetrogeneDB ID:
retro_mputfur_838
Organism:
Location:
GL896955.1:1454072-1454519 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
95.3 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
2


Parental gene:
Parental gene symbol:
CALM2
Parental gene aliases:
No gene alias available
Parental gene description:
calmodulin 2 (phosphorylase kinase, delta) [Source:HGNC Symbol;Acc:1445]

Genomic region (view in browser)





>retro_mputfur_838
ATGGCTGATCAGCTCACCGAAGAACAGATCGCTGAGTTCTAGGAAGCGTTCTCCCTATTT
GACAAAGATGACGACGGCACCATCACAACAAAGGAACTTGGAACTGTCATGAGGTCACTG
GGTTAGAACCCAACAGAAGCCGAATTGCAGGATATGATCAACGAGGTGGATGCTGACGGT
AATGGCACCATTGACTTCCCGGAATTCTTGACTCTGATGGCTAGAAAAATGAAAGATACA
GACAGCGAAGAAGAAATTCGCGAGGCGTTCCGAGTCTTTGACAAGGATGGCAGCGGTTCC
ATCAGTGCGGCAGAGCTTCGTCATGTCATGACCAACTTAGGGGAGAAACTAACAGACGAA
GAAGTAGATGAAATGATCAGAGAAGCAGATATTGAGGGAGACGGGCAAGTCAACTATGAA
GAATTCGTACAGATGATGACTGCAAAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY
MADQLTEEQIAEF.EAFSLFDKD.DGTITTKELGTVMRSLG.NPTEAELQDMINEVDADGNGTIDFPEFLT.MARKMKDTDSEEEIREAFRVFDKDG.G.
Retrocopy
MADQLTEEQIAEF*EAFSLFDKDDDGTITTKELGTVMRSLG*NPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIREAFRVFDKDGSGS


Parental protein
ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK
ISAAELRHVMTNLGEKLTDEEVDEMIREADI.GDGQVNYEEFVQMMTAK
Retrocopy
ISAAELRHVMTNLGEKLTDEEVDEMIREADIEGDGQVNYEEFVQMMTAK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide